Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq5459 95.1 1e-14 >seq5459 Length=1306269 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| |||| ||||| || |||| || | ||| |||||||| || |||||||| || | Sbjct 706101 TTCCTCCTCTGAGCCTTAGTACCAAGTGGAGAGTTGACTCCTTCTGGATGTTATAATCTG 706160 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 || ||| | || ||||||||||| || ||| | || | | ||||| || || Sbjct 706161 ACAAAGTTCTCCCATCTTCCAGCTGTTTCCCAGCAAAGATCAAACGTTGCTGATCAGGGG 706220 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | |||||||| || ||| ||| ||||| | | | |||||| | || Sbjct 706221 GAATTCCTTCCTTATCTTGGATTTTTGCCTTCACATTCTCTATTGTATCAGAAGCTTCTA 706280 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 ||||| ||||||||| || || || | || |||||||| ||||||||| Sbjct 706281 CTTCCAAGGTAATGGTTTTTCCTGTCAGTGTCTTGACAAAGATTTGCATT 706330 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || | || || || |||| || | ||| |||||||| || |||||||| || | Sbjct 705645 TTCCTCCCCTGAGTCTTAGTACCAAGTGAAGAGTTGACTCCTTCTGGATGTTATAATCTG 705704 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | ||| | || ||||||||||| || ||| | || | | ||||| || || Sbjct 705705 ATAAAGTTCTTCCATCTTCCAGCTGTTTCCCAGCAAAGATCAAACGTTGCTGATCAGGGG 705764 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | |||||||| || ||||||| ||||| | | | || ||| | || Sbjct 705765 GAATTCCTTCCTTATCTTGGATCTTTGCCTTCACATTCTCTATTGTGTCAGAAGCTTCTA 705824 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 ||||| |||||||||||| || || | ||||||||||| ||||||||| Sbjct 705825 CTTCCAAGGTAATGGTCTTTCCTGTCAGTGTTTTGACAAAGATTTGCATT 705874 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 ||||||| | || || | |||| ||| | || |||||||| ||||||||||| || | Sbjct 705873 TTCCCCCCCTGAGTCTCAATACCAAATGTAGTGTTGACTCCTTCTGAATGTTATAATCTG 705932 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 || ||| | || || | ||||||||| ||| | || | | ||||||||| | Sbjct 705933 AAAGAGTTCTTCCATCTTCTAACTGTTTGCCAGCAAAGATCAAGCGCTGCTGGTCTGGAG 705992 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||||| ||||| ||||||| ||||| | | | |||||| | || Sbjct 705993 GGATTCCTTCTTTGTCTTGGATCTTTGCCTTCACATTCTCTATTGTATCAGAAGCTTCTA 706052 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| ||| ||||| || || || | || || ||||| ||||||||| Sbjct 706053 CCTCCAAGGTGATGGTTTTCCCTGTGAGGGTCTTTACAAAGATTTGCATT 706102 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| |||| || || | |||| ||| | || |||||||| ||||||||||| |||| Sbjct 709646 TTCCACCTCTGAGTCTCAATACCAAATGTATTGTTGACTCCTTCTGAATGTTATAATCCG 709705 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 || ||| | || |||| |||||||| ||| | || | | ||||||||| || | Sbjct 709706 AAAGAGTTCTCCCATCTTCCAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTACAG 709765 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | || || ||||| ||| || ||| || | | | |||||| | || Sbjct 709766 AGATTCCATCTTTGTCTTGGATTTTAGCTTTTACATTCTCTATTGTATCAGAAGCTTCTA 709825 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| ||| ||||| || || | | ||||||||||| ||||||||| Sbjct 709826 CCTCCAAGGTGATGGTTTTTCCTGACAGTGTTTTGACAAAGATTTGCATT 709875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421293700512476