Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09]
187,611 sequences; 596,278,454 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq5459 95.1 1e-14
>seq5459
Length=1306269
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| |||| ||||| || |||| || | ||| |||||||| || |||||||| || |
Sbjct 706101 TTCCTCCTCTGAGCCTTAGTACCAAGTGGAGAGTTGACTCCTTCTGGATGTTATAATCTG 706160
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
|| ||| | || ||||||||||| || ||| | || | | ||||| || ||
Sbjct 706161 ACAAAGTTCTCCCATCTTCCAGCTGTTTCCCAGCAAAGATCAAACGTTGCTGATCAGGGG 706220
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | |||||||| || ||| ||| ||||| | | | |||||| | ||
Sbjct 706221 GAATTCCTTCCTTATCTTGGATTTTTGCCTTCACATTCTCTATTGTATCAGAAGCTTCTA 706280
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
||||| ||||||||| || || || | || |||||||| |||||||||
Sbjct 706281 CTTCCAAGGTAATGGTTTTTCCTGTCAGTGTCTTGACAAAGATTTGCATT 706330
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| || | || || || |||| || | ||| |||||||| || |||||||| || |
Sbjct 705645 TTCCTCCCCTGAGTCTTAGTACCAAGTGAAGAGTTGACTCCTTCTGGATGTTATAATCTG 705704
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
| ||| | || ||||||||||| || ||| | || | | ||||| || ||
Sbjct 705705 ATAAAGTTCTTCCATCTTCCAGCTGTTTCCCAGCAAAGATCAAACGTTGCTGATCAGGGG 705764
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | |||||||| || ||||||| ||||| | | | || ||| | ||
Sbjct 705765 GAATTCCTTCCTTATCTTGGATCTTTGCCTTCACATTCTCTATTGTGTCAGAAGCTTCTA 705824
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
||||| |||||||||||| || || | ||||||||||| |||||||||
Sbjct 705825 CTTCCAAGGTAATGGTCTTTCCTGTCAGTGTTTTGACAAAGATTTGCATT 705874
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
||||||| | || || | |||| ||| | || |||||||| ||||||||||| || |
Sbjct 705873 TTCCCCCCCTGAGTCTCAATACCAAATGTAGTGTTGACTCCTTCTGAATGTTATAATCTG 705932
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
|| ||| | || || | ||||||||| ||| | || | | ||||||||| |
Sbjct 705933 AAAGAGTTCTTCCATCTTCTAACTGTTTGCCAGCAAAGATCAAGCGCTGCTGGTCTGGAG 705992
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | ||||| ||||| ||||||| ||||| | | | |||||| | ||
Sbjct 705993 GGATTCCTTCTTTGTCTTGGATCTTTGCCTTCACATTCTCTATTGTATCAGAAGCTTCTA 706052
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
|||| ||| ||||| || || || | || || ||||| |||||||||
Sbjct 706053 CCTCCAAGGTGATGGTTTTCCCTGTGAGGGTCTTTACAAAGATTTGCATT 706102
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| |||| || || | |||| ||| | || |||||||| ||||||||||| ||||
Sbjct 709646 TTCCACCTCTGAGTCTCAATACCAAATGTATTGTTGACTCCTTCTGAATGTTATAATCCG 709705
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
|| ||| | || |||| |||||||| ||| | || | | ||||||||| || |
Sbjct 709706 AAAGAGTTCTCCCATCTTCCAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTACAG 709765
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| || || ||||| ||| || ||| || | | | |||||| | ||
Sbjct 709766 AGATTCCATCTTTGTCTTGGATTTTAGCTTTTACATTCTCTATTGTATCAGAAGCTTCTA 709825
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
|||| ||| ||||| || || | | ||||||||||| |||||||||
Sbjct 709826 CCTCCAAGGTGATGGTTTTTCCTGACAGTGTTTTGACAAAGATTTGCATT 709875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421293700512476
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |