Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09]
187,611 sequences; 596,278,454 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq967 111 1e-19
>seq967
Length=1612715
Score = 111 bits (122), Expect = 1e-19
Identities = 153/210 (73%), Gaps = 3/210 (1%)
Strand=Plus/Minus
Query 16487 TTTTCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATA 16546
||||||| || |||| |||||| || || || | |||| ||||||||||||||| | |
Sbjct 653259 TTTTCTTAGC-ATCTGTAATATATGTGTCAATCAATAAAGAATACATTTCTGAATGTACA 653201
Query 16547 TTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCA-GA 16605
|| ||||| || | ||||| |||||||| || | || || | || |||||||| ||
Sbjct 653200 TTTTCCATGGCAACTTGAAAGCCATAAAAACAACGTGCCTCTGTTACCTGTACTTCTTGA 653141
Query 16606 GTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAG 16665
|||| | || | | | ||||| |||||||||||||| ||| |||||||| || |
Sbjct 653140 CTAAATCGTT-CAACAAGATTTTCATTAACTATTCCATCAGAAGCAGCAAAAAATGCTAA 653082
Query 16666 TATGTGTTTAATAAAAtttttttCGTTATC 16695
|| || ||||||| ||| || || ||
Sbjct 653081 TACATGAGATATAAAATGTTTCTCATTGTC 653052
Score = 102 bits (112), Expect = 8e-17
Identities = 86/106 (81%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 16285 AAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACC 16344
||||||||| ||||||||||| |||| ||| || | ||| |||||||| ||||| ||
Sbjct 653531 AAATGTAAGTCCTGGCATTAGACCTCTTTTCTTTAGCCAGAATATAGCAGCAAAACTGCC 653472
Query 16345 AGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCA 16390
| |||||| |||||||| || || ||||||||||||| ||||||
Sbjct 653471 ACTAAAGAAAATACCTTCTACCGCAGCAAATGCAACCACACGCTCA 653426
Score = 89.7 bits (98), Expect = 5e-13
Identities = 153/218 (70%), Gaps = 12/218 (6%)
Strand=Plus/Minus
Query 16046 CATCCCAATTCCAACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCA 16105
|| || ||||| | | |||||||| || |||||||| ||||| || ||| | |
Sbjct 653881 CAGCCTAATTCTATAAGCAATCTATCTGCAACAAATTCAATATATTGGCACATAAGTTTG 653822
Query 16106 CAGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTA 16165
|||||||| ||||| | || |||||| | |||||||||||||| | || ||| || ||
Sbjct 653821 CAGTTCATGCCTATCATTTCAACAGGCAAAGCTTCTGTTAAAAATTCTTGTTCAATTTTG 653762
Query 16166 ACCGCTTCAATGATTATATCTCTTACTACACTATTTAACGGAG--GGTTT---AATAA-G 16219
|| || || | || || | | ||| | || ||||| ||||| |||| |
Sbjct 653761 ACAGCATCTTTAATAATTGATGTGACT---CGAT---CCGGAGGTGGTTTTTGTATAATG 653708
Query 16220 TGTTTAAACATTATACAAGCAAAATCACAATGCAATCC 16257
||||| ||||||| ||| || ||||| ||||| || ||
Sbjct 653707 TGTTTGAACATTAAACATGCGAAATCGCAATGTAACCC 653670
Score = 86.0 bits (94), Expect = 6e-12
Identities = 68/82 (83%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003
|||||||| || | ||| |||| ||||| || || ||||| |||||||| |||||||
Sbjct 654057 TTTTGATACTCTCCTACTTTCTTCTCAAAAAAGTTCGTTTTACCTTCTAAAGAAATATGC 653998
Query 16004 TCCATAAAATCAAAAGGATTTT 16025
|||||||||||||| |||||||
Sbjct 653997 TCCATAAAATCAAATGGATTTT 653976
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 461427345764600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |