Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq5123 140 3e-28 >seq5123 Length=351926 Score = 140 bits (154), Expect = 3e-28 Identities = 185/254 (73%), Gaps = 2/254 (1%) Strand=Plus/Plus Query 20051 TATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGGTTTATTA 20110 ||||||| || ||||| |||||||||| ||||||||| ||||| || ||||||||||||| Sbjct 332160 TATTAACAACAAAACGAGTATTTTGGAGAGGCGTTGTGGAAGAATTGTTATGGTTTATTA 332219 Query 20111 AAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGAGCGCACATG 20170 |||||||||||| | | ||| | |||||||| || | |||||| | | | Sbjct 332220 GGGGATCAACAAATGCAAAAGAGTTAAGTGAAAAAGGTATTCACATTTGGGATGAAAACA 332279 Query 20171 GATCTAAGCAATTTTTACACAGCAATGGATTTGACA-ACCGTCAAGAGGGGGATTTGGGT 20229 | || |||||| | ||| ||| ||| | | |||| || ||||| || Sbjct 332280 GCTCACGTGTGTTTTTAGATTCTTCTGG-TTTTACAGATAGGGAAGAAGGAGATTTAGGG 332338 Query 20230 CCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAACACAAAT 20289 ||||| |||||||||||||||||||||||||| || ||||| | || ||| | || || Sbjct 332339 CCTGTTTATGGATTTCAATGGAGACATTTTGGTGCAAAATATATAGATATGCATGCAGAT 332398 Query 20290 TATTTTGGACAAGG 20303 ||| ||| ||||| Sbjct 332399 TATAATGGGCAAGG 332412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398271262166395