Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09]
187,611 sequences; 596,278,454 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq967 122 8e-23
>seq967
Length=1612715
Score = 122 bits (134), Expect = 8e-23
Identities = 142/186 (76%), Gaps = 7/186 (4%)
Strand=Plus/Minus
Query 14454 CCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTA 14513
|||| |||| || | || ||| ||||| ||||| | ||| ||||||||| || ||||
Sbjct 653261 CCTTTTCTT-AGCATCTGTAATATATGTGTCAATCAATAAAGAATACATTTCTGAATGTA 653203
Query 14514 TGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTG--ACCATTGTACCTC 14571
|||||||| || | ||||| ||||||||||| | || |||| ||| ||||| ||
Sbjct 653202 CATTTTCCATGGCAACTTGAAAGCCATAAAAACAACGTGCCTCTGTTACC--TGTACTTC 653145
Query 14572 T-GAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATG 14630
| || |||| || ||| | | ||||||||||||||| |||||| ||| ||||||||||
Sbjct 653144 TTGACTAAA-TCGTTCAACAAGATTTTCATTAACTATTCCATCAGAAGCAGCAAAAAATG 653086
Query 14631 CCAATA 14636
| ||||
Sbjct 653085 CTAATA 653080
Score = 86.0 bits (94), Expect = 6e-12
Identities = 159/232 (69%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 14000 ATAAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATAT 14059
||| | || || | ||| |||| ||||| || |||||||| |||| || |||||||||
Sbjct 653896 ATACAAACCTTTTGACAGCCTAATTCTATAAGCAATCTATCTGCAACAAATTCAATATAT 653837
Query 14060 TGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAAT 14119
|| |||| | | || ||||| ||||| | || ||||| | | |||||||||
Sbjct 653836 TGGCACATAAGTTTGCAGTTCATGCCTATCATTTCAACAGGCAAAGCTTCTGTTAAAAAT 653777
Query 14120 TCTTTTTCTATAGACACAGCCTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGA 14179
|||| ||| || ||||| || | ||||||| | | | | || | ||| ||
Sbjct 653776 TCTTGTTCAATTTTGACAGCATC---TTTAATAATTGATGTGACTCGATCCGGAGGTGGT 653720
Query 14180 TATTTTAGA---TGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCT 14228
| || || | ||||| || |||||||| || ||||| ||||| | ||||
Sbjct 653719 TTTTGTATAATGTGTTTGAACATTAAACATGCGAAATCGCAATGTAACCCCT 653668
Score = 82.4 bits (90), Expect = 7e-11
Identities = 72/90 (80%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972
|||||||| || | ||| | || ||||| ||||| ||||||||||| | || ||||
Sbjct 654057 TTTTGATACTCTCCTACTTTCTTCTCAAAAAAGTTCGTTTTACCTTCTAAAGAAATATGC 653998
Query 13973 TCCATAAAATCAAATGGATTTGTTGACATA 14002
||||||||||||||||||||| ||||||
Sbjct 653997 TCCATAAAATCAAATGGATTTTCAGACATA 653968
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 481214433245480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |