Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq967 122 8e-23 >seq967 Length=1612715 Score = 122 bits (134), Expect = 8e-23 Identities = 142/186 (76%), Gaps = 7/186 (4%) Strand=Plus/Minus Query 14454 CCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTA 14513 |||| |||| || | || ||| ||||| ||||| | ||| ||||||||| || |||| Sbjct 653261 CCTTTTCTT-AGCATCTGTAATATATGTGTCAATCAATAAAGAATACATTTCTGAATGTA 653203 Query 14514 TGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTG--ACCATTGTACCTC 14571 |||||||| || | ||||| ||||||||||| | || |||| ||| ||||| || Sbjct 653202 CATTTTCCATGGCAACTTGAAAGCCATAAAAACAACGTGCCTCTGTTACC--TGTACTTC 653145 Query 14572 T-GAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATG 14630 | || |||| || ||| | | ||||||||||||||| |||||| ||| |||||||||| Sbjct 653144 TTGACTAAA-TCGTTCAACAAGATTTTCATTAACTATTCCATCAGAAGCAGCAAAAAATG 653086 Query 14631 CCAATA 14636 | |||| Sbjct 653085 CTAATA 653080 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 14000 ATAAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATAT 14059 ||| | || || | ||| |||| ||||| || |||||||| |||| || ||||||||| Sbjct 653896 ATACAAACCTTTTGACAGCCTAATTCTATAAGCAATCTATCTGCAACAAATTCAATATAT 653837 Query 14060 TGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAAT 14119 || |||| | | || ||||| ||||| | || ||||| | | ||||||||| Sbjct 653836 TGGCACATAAGTTTGCAGTTCATGCCTATCATTTCAACAGGCAAAGCTTCTGTTAAAAAT 653777 Query 14120 TCTTTTTCTATAGACACAGCCTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGA 14179 |||| ||| || ||||| || | ||||||| | | | | || | ||| || Sbjct 653776 TCTTGTTCAATTTTGACAGCATC---TTTAATAATTGATGTGACTCGATCCGGAGGTGGT 653720 Query 14180 TATTTTAGA---TGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCT 14228 | || || | ||||| || |||||||| || ||||| ||||| | |||| Sbjct 653719 TTTTGTATAATGTGTTTGAACATTAAACATGCGAAATCGCAATGTAACCCCT 653668 Score = 82.4 bits (90), Expect = 7e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 |||||||| || | ||| | || ||||| ||||| ||||||||||| | || |||| Sbjct 654057 TTTTGATACTCTCCTACTTTCTTCTCAAAAAAGTTCGTTTTACCTTCTAAAGAAATATGC 653998 Query 13973 TCCATAAAATCAAATGGATTTGTTGACATA 14002 ||||||||||||||||||||| |||||| Sbjct 653997 TCCATAAAATCAAATGGATTTTCAGACATA 653968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481214433245480