Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq1073 89.7 7e-13 >seq1073 Length=1777474 Score = 89.7 bits (98), Expect = 7e-13 Identities = 139/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 19429 AAAAATATATCTAGGACTTGCTGCATCTTTTCCTCCAGAAAGTCTCGTGCCAAATTGGCC 19488 ||| || |||| |||||| ||||||||||||||||| | |||||| || |||||||| || Sbjct 443641 AAAGATGTATCGAGGACTCGCTGCATCTTTTCCTCCTGTAAGTCTTGTACCAAATTGACC 443582 Query 19489 ATCCTCTTCTAAAAGAGGTATGTTATTGGCTCCAACAAAAGTTTGTGCCATTTTAATGAT 19548 | || | | | |||||||||| ||| || ||| ||||||| | ||||| || Sbjct 443581 AATTGGTTGAAGTAAATTTATGTTATTGCTTCCTACGAAATTTTGTGCAAGATTAATAAT 443522 Query 19549 AG-TGTCAAATAGATTTTGTTCTCCATGTTTATAATCTGTTTTTTGTGCTACGAAAGCTC 19607 | || || | ||| ||| ||||| | ||| ||| | || ||||| || | Sbjct 443521 TGTTGACATA-AGAGAAACTTCACCATGATGATATGCTGAATGTTCGGCTACAGAACCAG 443463 Query 19608 CTAATTGGGCAACTTT 19623 |||| || |||||||| Sbjct 443462 CTAACTGTGCAACTTT 443447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 678220141757520