Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09]
187,611 sequences; 596,278,454 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq731 217 2e-51
seq967 152 7e-32
>seq731
Length=568950
Score = 217 bits (240), Expect = 2e-51
Identities = 236/311 (76%), Gaps = 4/311 (1%)
Strand=Plus/Plus
Query 78966 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCT 79025
||| || || ||| || ||| ||||| |||||| || || |||||||| | |||||
Sbjct 414486 CTGGATAGAACCATTATTTGCTATAATTTCATTCTTCATATCCTCATTCCAAAGATTTCT 414545
Query 79026 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 79085
|| |||||| ||| | | ||| ||||| || | |||||| ||||| ||||| |||||
Sbjct 414546 TTCAGTTAAATCTCGCAACAAATGAGGATTTACGATTTGAAACTCTCCTGACAAAACTCT 414605
Query 79086 CCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGC 79145
| || ||||||||||||||||||||||| | || |||||||||||||||||||| ||
Sbjct 414606 TCTTGTATAAATATTACTGGTATATGGTTCTATAGACTCATTATTTCCCAAAATTTGTGC 414665
Query 79146 AGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTG-- 79203
||| ||||| |||||||||||||| | | |||| ||||| || ||| ||| | |
Sbjct 414666 AGTAGATGCTGTTGGCATAGGTGCAATTAGTAAAGAATTTCGAATACC--ATGTTTAGCA 414723
Query 79204 ATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCA 79263
||||| |||||| | || ||||||||| | ||| | || ||||||||| | |||
Sbjct 414724 ATTTTTGCTTTTAATGTTTTCCAATCCCATAAATCTGTTGGAGTAACATTCCACATGTCA 414783
Query 79264 TATTGTAGAAT 79274
||||||| |||
Sbjct 414784 TATTGTAAAAT 414794
Score = 129 bits (142), Expect = 8e-25
Identities = 222/315 (70%), Gaps = 8/315 (3%)
Strand=Plus/Plus
Query 80005 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 80064
|| |||||||| ||||||||||| | || | | |||||| | |||||| ||||| |
Sbjct 415895 TTACCTGTATTTTTTTTAAGATCTAAAAATTCAAAAATATCTGCATGCCATGGTTCTACA 415954
Query 80065 TATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 80124
||||| || | |||| |||| ||| ||||| || ||||| | |||| || || |||
Sbjct 415955 TATATAGCAAATGCTCCTGGTCTTTTATTTCCACCTTGATCAACATATCGCGCTGTATTA 416014
Query 80125 TTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAG 80184
||||| ||||| | ||| ||||| | |||||| ||| |||| || || || ||| |
Sbjct 416015 TTATATACTCTGATCATAGGAATCAAACCATTAGATACACCAAGTGTACC--AGCTATTG 416072
Query 80185 --CTTCCACTGGCACGAATATTA-CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAG 80241
| || || || |||||| | || | | || || || || || ||| ||||
Sbjct 416073 GTGTACCTCTTGCTCGAATACAATGTACATTA-AGTCCAATACCACCAGCCGATTTACTA 416131
Query 80242 ATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCA-TGTT 80300
|| | ||| || |||||| |||| ||| || || || ||||||||||| || ||||
Sbjct 416132 ATAAGTGCACACTTTTTTAATGTATTATATATTCCTTCAATGCTATCATCTTCCATTGTT 416191
Query 80301 AAGTAGAAAACAGCT 80315
|| || |||||| ||
Sbjct 416192 AA-TAAAAAACAACT 416205
Score = 107 bits (118), Expect = 3e-18
Identities = 124/167 (74%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 79850 TATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGAC 79909
||||||| ||| || || || ||||||||||| | || |||||| |||||| ||||
Sbjct 415638 TATATAAAGCTTCAAATTCATCGCCCCAAACATCATGTAGACCAGGAGATTCGTGTGGAC 415697
Query 79910 ACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAA 79969
|||| || ||| | | ||| || | |||||||||||||| |||||||| ||||| |
Sbjct 415698 ACATTAAACTCCATTTTTCATTATTCAAAACTCGTTTCATAAAAAGATCAGGTATCCATA 415757
Query 79970 GAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTC 80016
||| ||||| ||||| | ||||| || || || |||||| ||
Sbjct 415758 AAGCATAAAATAATTCTCTTGCTCTATTTTCTTCCTTACCTGTAGTC 415804
Score = 100 bits (110), Expect = 4e-16
Identities = 260/392 (66%), Gaps = 16/392 (4%)
Strand=Plus/Plus
Query 79460 TACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAA 79519
|||| |||||||||||| | ||| || | || || |||| ||| ||||||||||| |
Sbjct 415180 TACCCATAGGTCTATGTTTAAAATTTGATACTTTTGCCTCTGAAATCGGATAATAATTGA 415239
Query 79520 TATCTATAATTTTATTGAGATTCC---TGACTATTACTTTGACCACATCCTTTAGTTTGA 79576
|| |||| ||| | | ||| | | || ||| |||| | || || || ||
Sbjct 415240 CGTCGATAACTTTGTCTAAATTACGCGTAACAATT--TTTGTC-ACTTCTCGAAGCTTTT 415296
Query 79577 GAAAATCAAATCGTCCATCTAT-------TACAAACATGTTCAACGCGACAGATGCCAGA 79629
|||||||| || |||| ||| ||||||||| || | || | || || | |
Sbjct 415297 GAAAATCATAT-GTCCTATTATCAGAATTTACAAACATATTTACAGCAATTGAGGCTAAA 415355
Query 79630 TTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTA 79689
|| || || || | ||||| | | | ||| | || |||||||| || | ||||||
Sbjct 415356 TTGCACACTGCAATTTCATTTGGACTAGAATACTCTACAATTTCAGTACACAAATTACTA 415415
Query 79690 CACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGA 79749
||||| || ||||| ||||||| ||||| || || || ||| ||||||||
Sbjct 415416 CACTTGATTGTTCCCAAATTTTTATGATTTGATTTACGATTGCAATGATCTTTATAAAGC 415475
Query 79750 ATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCC 79809
|| | ||||| || ||||||| || | | | ||| ||| |||| | ||| |||
Sbjct 415476 ATATAAGGAGTTCCTGTTTCAACTTGGGCAACAAGAATAGCTGTCCATAATTCTCTAGCT 415535
Query 79810 TTTATTATAGACTTGTATCTCTTTTCTCTTTC 79841
| || | ||| | ||| | ||||||| |||
Sbjct 415536 TGAAT--TTGACGTTTATATATTTTCTCATTC 415565
Score = 96.9 bits (106), Expect = 5e-15
Identities = 183/269 (68%), Gaps = 8/269 (3%)
Strand=Plus/Plus
Query 80314 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 80373
||||||||||| || | |||| | ||| ||| | || ||||| || || |||||
Sbjct 416269 CTAGACATTTGTTGTTGTATAGTACATGCAGAAAAAAGTGTTGGAGATGCATGTGTAAAA 416328
Query 80374 CATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC----CCATTGATG 80429
| ||| || | | ||| || || || ||| || |||||| || |||| ||||
Sbjct 416329 TAACGTTCTGATAAAAAATTATAAGTTTCTATAACTCTTTCTATGTCTTCACCATGGATG 416388
Query 80430 AATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTAT 80489
| || || || | ||||||||| || || ||||||||||| | || || |||
Sbjct 416389 ----GCAACTGCAACTCTCATTAACATATGTTGTGGTCTTTCAACAACTTTCCCATGTAT 416444
Query 80490 TTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 80549
||| | |||||| |||| | ||||| |||||||||||||| || |||||||
Sbjct 416445 TTTTAGTAAGTAACTCCTTTCAAGCGTTTTGAAACCAAAATAGTTATAGCTGAAGTCTCT 416504
Query 80550 TTCGTAAATAATAACCGAGTTGAGTTTAT 80578
|| ||||| || | ||||| | ||||
Sbjct 416505 ATCATAAATTATTGCAGAGTTTAACTTAT 416533
Score = 84.2 bits (92), Expect = 3e-11
Identities = 121/171 (71%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 79293 TCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGC 79352
|||| | || |||||||| | |||| || || || | ||||| || || ||||| ||
Sbjct 414934 TCCTTTATAGGTTTCATATGTACCTTTCTCCTCAGCAAGCTCACAGCTAGCTTCTAAAGC 414993
Query 79353 TCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAA 79412
| |||||| | ||||| || |||| |||| || | ||||| ||| || |||||
Sbjct 414994 ACTGTAATATAACGTTTCAAATATCTGGATATTAAGCTTCTGTGCCTCTTCACTTTCAAA 415053
Query 79413 TGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACC 79463
|||||| | | || ||| || ||||| | |||||||| ||||||||
Sbjct 415054 TGGATATCGCATTAAAAGAAATGCATCTGCAAGACCTTGAACTCCAATACC 415104
Score = 84.2 bits (92), Expect = 3e-11
Identities = 93/124 (75%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 80678 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAA 80737
||||||| ||| ||||| || || || ||||| || || || |||| || ||||| |
Sbjct 416852 CACTAAAGCTTTTCTTTGTCTCTTTATGAAGATTCGAGACTGCAATTCGTGCAGCTAATA 416911
Query 80738 TGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 80797
| |||||||||||||||| || || ||| ||||| |||| ||||| ||| | || |
Sbjct 416912 TTGCATAATCTGGATGTTTAGTTGTCATAGTTGCTGCAGTTTCAGCTGCAAGATTATCTA 416971
Query 80798 ATTC 80801
||||
Sbjct 416972 ATTC 416975
>seq967
Length=1612715
Score = 152 bits (168), Expect = 7e-32
Identities = 176/236 (75%), Gaps = 1/236 (0%)
Strand=Plus/Minus
Query 50209 TTTTCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATG 50268
||||| ||| |||| ||| ||| || || ||||| | | ||||||||| ||||| |
Sbjct 653259 TTTTC-TTAGCATCTGTAATATATGTGTCAATCAATAAAGAATACATTTCTGAATGTACA 653201
Query 50269 TTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTA 50328
||||| ||||| | ||||| || || ||||| | ||||| || | ||| |||||| |
Sbjct 653200 TTTTCCATGGCAACTTGAAAGCCATAAAAACAACGTGCCTCTGTTACCTGTACTTCTTGA 653141
Query 50329 CAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAAT 50388
| |||||||||| | | ||||||||| |||||||| ||| || |||||||| || |||
Sbjct 653140 CTAAATCGTTCAACAAGATTTTCATTAACTATTCCATCAGAAGCAGCAAAAAATGCTAAT 653081
Query 50389 ACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATC 50444
||||| |||||||||||| || ||| |||| |||||| ||| |||||
Sbjct 653080 ACATGAGATATAAAATGTTTCTCATTGTCAGTTAAACGATTCCAGTCAAATATATC 653025
Score = 114 bits (126), Expect = 2e-20
Identities = 90/108 (83%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 50446 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 50505
||||| | || |||||||||||||||||||| |||||||| || |||||||||||||||
Sbjct 652949 TTAGAGAGGTCCACTTCTTCCACTGTCCAAAAAGATGCCTCAGCTTTTTTATACATATTC 652890
Query 50506 CAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 50553
|| |||||| | |||| || || |||| |||||| ||| |||||||
Sbjct 652889 CAAATGTCAGGCCATTGAATAGGAAAAACAACAAACCTACGTGGATTT 652842
Score = 96.9 bits (106), Expect = 5e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 49757 TATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATG 49816
|| ||| |||| | | || ||||| || ||||||||| || |||||||| ||||||
Sbjct 653895 TACAAACCTTTTGACAGCCTAATTCTATAAGCAATCTATCTGCAACAAATTCAATATATT 653836
Query 49817 TTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATT 49876
||| | || || ||||| ||||| | || ||| || | ||| | || | |||||
Sbjct 653835 GGCACATAAGTTTGCAGTTCATGCCTATCATTTCAACAGGCAAAGCTTCTGTTAAAAATT 653776
Query 49877 CTTGTTCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGAT 49936
|||||||||| || |||||| | ||||| ||| | || || | ||| |
Sbjct 653775 CTTGTTCAATTTTGACAGCATCTTTAATAATTGATGTGACTCGATCCGGAGGTGGTTTTT 653716
Query 49937 GCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCT 49984
| | | ||||| ||||| ||||||||||||||||| || | ||||
Sbjct 653715 GTATAATGTGTTTGAACATTAAACATGCGAAATCGCAATGTAACCCCT 653668
Score = 95.1 bits (104), Expect = 2e-14
Identities = 158/228 (69%), Gaps = 3/228 (1%)
Strand=Plus/Minus
Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041
||||||||||| ||| ||||| || ||| || ||||| |||||||| || | || |
Sbjct 653559 CCTCGTCTCTAGAAATAAGTTCATTACTAAATGTAAGTCCTGGCATTAGACCTCTTTTCT 653500
Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101
| ||||| ||||| | ||||| ||| |||||| || |||||||| || ||||| |
Sbjct 653499 TTAGCCAGAATATAGCAGCAAAACTGCCACTAAAGAAAATACCTTCTACCGCAGCAAATG 653440
Query 50102 CAACAAGTCTCTCTCCATAACTGGCGCTGTCATG---TATCCACTTTTGAGCCCAATCGG 50158
|||| | | ||| | | | || || || || ||||| ||| ||||| | |
Sbjct 653439 CAACCACACGCTCAGGAAAGGTCGCACTTTCGTGAGTAATCCAATTTAATGCCCAGTTAG 653380
Query 50159 CCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGT 50206
| |||||| ||||| |||| |||| || || ||||| | | |||
Sbjct 653379 CTTTCTTTGCGACACATGGCAAATTTTCGATCGCGTTAAACAAAAAGT 653332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716584360902040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |