Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09]
187,611 sequences; 596,278,454 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq967 104 2e-17
>seq967
Length=1612715
Score = 104 bits (114), Expect = 2e-17
Identities = 138/186 (74%), Gaps = 7/186 (4%)
Strand=Plus/Minus
Query 13910 CCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTA 13969
|||| |||| || | || ||| ||||| ||||| | ||| ||||||||| || ||||
Sbjct 653261 CCTTTTCTT-AGCATCTGTAATATATGTGTCAATCAATAAAGAATACATTTCTGAATGTA 653203
Query 13970 TGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTG--ACCATTGTACCTC 14027
||||| || || | ||||| ||||||||||| | || |||| ||| ||||| ||
Sbjct 653202 CATTTTCCATGGCAACTTGAAAGCCATAAAAACAACGTGCCTCTGTTACC--TGTACTTC 653145
Query 14028 C-GAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATG 14086
|| |||| || ||| | | ||||||||||| || |||||| ||| ||||||||||
Sbjct 653144 TTGACTAAA-TCGTTCAACAAGATTTTCATTAACTATTCCATCAGAAGCAGCAAAAAATG 653086
Query 14087 CCAATA 14092
| ||||
Sbjct 653085 CTAATA 653080
Score = 82.4 bits (90), Expect = 7e-11
Identities = 72/90 (80%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428
|||||||| || | ||| | || ||||||||||| ||||||||||| | || ||||
Sbjct 654057 TTTTGATACTCTCCTACTTTCTTCTCAAAAAAGTTCGTTTTACCTTCTAAAGAAATATGC 653998
Query 13429 TCCATAAAATCGAATGGATTTGTTGACATA 13458
||||||||||| ||||||||| ||||||
Sbjct 653997 TCCATAAAATCAAATGGATTTTCAGACATA 653968
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 477466443458040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |