Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq967 104 2e-17 >seq967 Length=1612715 Score = 104 bits (114), Expect = 2e-17 Identities = 138/186 (74%), Gaps = 7/186 (4%) Strand=Plus/Minus Query 13910 CCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTA 13969 |||| |||| || | || ||| ||||| ||||| | ||| ||||||||| || |||| Sbjct 653261 CCTTTTCTT-AGCATCTGTAATATATGTGTCAATCAATAAAGAATACATTTCTGAATGTA 653203 Query 13970 TGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTG--ACCATTGTACCTC 14027 ||||| || || | ||||| ||||||||||| | || |||| ||| ||||| || Sbjct 653202 CATTTTCCATGGCAACTTGAAAGCCATAAAAACAACGTGCCTCTGTTACC--TGTACTTC 653145 Query 14028 C-GAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATG 14086 || |||| || ||| | | ||||||||||| || |||||| ||| |||||||||| Sbjct 653144 TTGACTAAA-TCGTTCAACAAGATTTTCATTAACTATTCCATCAGAAGCAGCAAAAAATG 653086 Query 14087 CCAATA 14092 | |||| Sbjct 653085 CTAATA 653080 Score = 82.4 bits (90), Expect = 7e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 |||||||| || | ||| | || ||||||||||| ||||||||||| | || |||| Sbjct 654057 TTTTGATACTCTCCTACTTTCTTCTCAAAAAAGTTCGTTTTACCTTCTAAAGAAATATGC 653998 Query 13429 TCCATAAAATCGAATGGATTTGTTGACATA 13458 ||||||||||| ||||||||| |||||| Sbjct 653997 TCCATAAAATCAAATGGATTTTCAGACATA 653968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477466443458040