Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09]
187,611 sequences; 596,278,454 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq731 192 8e-44
seq967 156 6e-33
>seq731
Length=568950
Score = 192 bits (212), Expect = 8e-44
Identities = 210/279 (75%), Gaps = 0/279 (0%)
Strand=Plus/Plus
Query 71049 CTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCT 71108
||| || || ||| || ||| ||||| ||| || || || |||||||| | |||||
Sbjct 414486 CTGGATAGAACCATTATTTGCTATAATTTCATTCTTCATATCCTCATTCCAAAGATTTCT 414545
Query 71109 CTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCT 71168
|| |||||| ||| | | ||||||||| || | |||||| ||||| ||||| |||||
Sbjct 414546 TTCAGTTAAATCTCGCAACAAATGAGGATTTACGATTTGAAACTCTCCTGACAAAACTCT 414605
Query 71169 ACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGC 71228
| || ||||||||||||||||| ||||| | ||||||||||||||||||||||| ||
Sbjct 414606 TCTTGTATAAATATTACTGGTATATGGTTCTATAGACTCATTATTTCCCAAAATTTGTGC 414665
Query 71229 AGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCATGTGATCGGAT 71288
||| ||||| || ||||||||||| | | || | ||||| || ||||||| ||
Sbjct 414666 AGTAGATGCTGTTGGCATAGGTGCAATTAGTAAAGAATTTCGAATACCATGTTTAGCAAT 414725
Query 71289 TTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGG 71327
||| |||||| | || ||||| ||| | ||| | |||
Sbjct 414726 TTTTGCTTTTAATGTTTTCCAATCCCATAAATCTGTTGG 414764
Score = 123 bits (136), Expect = 3e-23
Identities = 221/316 (70%), Gaps = 10/316 (3%)
Strand=Plus/Plus
Query 72088 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 72147
|| |||||||| ||||||||||| | || | | |||||| | |||||| ||||| |
Sbjct 415895 TTACCTGTATTTTTTTTAAGATCTAAAAATTCAAAAATATCTGCATGCCATGGTTCTACA 415954
Query 72148 TATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 72207
||||| || | |||| || | ||| ||||| || ||||| | |||| || || |||
Sbjct 415955 TATATAGCAAATGCTCCTGGTCTTTTATTTCCACCTTGATCAACATATCGCGCTGTATTA 416014
Query 72208 TTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAG 72267
||||| ||||| | ||| ||||| | |||||| ||| ||||| || || || ||| |
Sbjct 416015 TTATATACTCTGATCATAGGAATCAAACCATTAGATACACCAAGTGTACC--AGCTATTG 416072
Query 72268 --CTTCCACTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGA 72323
| || || || ||||| | || ||| || || || || || ||| ||||
Sbjct 416073 GTGTACCTCTTGCTCGAATACAATGTACATT--AAGTCCAATACCACCAGCCGATTTACT 416130
Query 72324 GATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCA-TGT 72382
|| | ||| || |||||| |||| ||| || || || || |||||||| || |||
Sbjct 416131 AATAAGTGCACACTTTTTTAATGTATTATATATTCCTTCAATGCTATCATCTTCCATTGT 416190
Query 72383 TAAGTAGAAAACAGCT 72398
||| || |||||| ||
Sbjct 416191 TAA-TAAAAAACAACT 416205
Score = 113 bits (124), Expect = 6e-20
Identities = 263/392 (67%), Gaps = 16/392 (4%)
Strand=Plus/Plus
Query 71543 TACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAA 71602
|||| |||||||| ||| | ||| || | || || |||| ||| ||||||||||| |
Sbjct 415180 TACCCATAGGTCTATGTTTAAAATTTGATACTTTTGCCTCTGAAATCGGATAATAATTGA 415239
Query 71603 TATCTATAATTTTATTGAGATTTC---TGACTATTACTTTGACCACATCCTTTAGTTTGA 71659
|| |||| ||| | | ||| | | || ||| |||| | || || || ||
Sbjct 415240 CGTCGATAACTTTGTCTAAATTACGCGTAACAATT--TTTGTC-ACTTCTCGAAGCTTTT 415296
Query 71660 GAAAATCAAATCTCCCATCTAT-------TACAAACACGTTCAAGGCAACAGATGCCAGA 71712
|||||||| || ||| || ||| |||||||| || | |||| || || | |
Sbjct 415297 GAAAATCATATGTCCTAT-TATCAGAATTTACAAACATATTTACAGCAATTGAGGCTAAA 415355
Query 71713 TTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTA 71772
|| || || || | ||||| | | | ||| | || ||||||||| || | |||||||
Sbjct 415356 TTGCACACTGCAATTTCATTTGGACTAGAATACTCTACAATTTCAGTACACAAATTACTA 415415
Query 71773 CACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGA 71832
|||||||| ||||| ||||||| ||||| || || || ||| ||||||||
Sbjct 415416 CACTTGATTGTTCCCAAATTTTTATGATTTGATTTACGATTGCAATGATCTTTATAAAGC 415475
Query 71833 ATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCC 71892
||| | ||||| || ||||||| || | | | ||| ||| |||| | ||| |||
Sbjct 415476 ATATAAGGAGTTCCTGTTTCAACTTGGGCAACAAGAATAGCTGTCCATAATTCTCTAGCT 415535
Query 71893 TTTATTATATTCTTGTATCTCTTTTCTCTTTC 71924
| ||| | | | ||| | ||||||| |||
Sbjct 415536 TGAATTTGA--CGTTTATATATTTTCTCATTC 415565
Score = 93.3 bits (102), Expect = 6e-14
Identities = 172/252 (68%), Gaps = 8/252 (3%)
Strand=Plus/Plus
Query 72397 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 72456
||||||||||| || | |||| | ||| ||| | || ||||| || || |||||
Sbjct 416269 CTAGACATTTGTTGTTGTATAGTACATGCAGAAAAAAGTGTTGGAGATGCATGTGTAAAA 416328
Query 72457 CATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC----CCATTGATG 72512
| ||| || | | ||| || || || ||| || |||||| || |||| ||||
Sbjct 416329 TAACGTTCTGATAAAAAATTATAAGTTTCTATAACTCTTTCTATGTCTTCACCATGGATG 416388
Query 72513 TATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTAT 72572
| || || || | |||||||||||| || ||||||||||| | || || |||
Sbjct 416389 ----GCAACTGCAACTCTCATTAACATATGTTGTGGTCTTTCAACAACTTTCCCATGTAT 416444
Query 72573 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 72632
||| | ||||| |||| | ||||| |||||||||||||| || |||||||
Sbjct 416445 TTTTAGTAAGTAACTCCTTTCAAGCGTTTTGAAACCAAAATAGTTATAGCTGAAGTCTCT 416504
Query 72633 TTCGTAAATAAT 72644
|| ||||| ||
Sbjct 416505 ATCATAAATTAT 416516
Score = 89.7 bits (98), Expect = 7e-13
Identities = 120/167 (72%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 71933 TATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGAC 71992
||||||| ||| || || || |||||| ||| | || |||||| |||| | ||||
Sbjct 415638 TATATAAAGCTTCAAATTCATCGCCCCAAACATCATGTAGACCAGGAGATTCGTGTGGAC 415697
Query 71993 ACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAA 72052
|||| || ||| | | ||| || |||||||||||||| |||||||| ||||| |
Sbjct 415698 ACATTAAACTCCATTTTTCATTATTCAAAACTCGTTTCATAAAAAGATCAGGTATCCATA 415757
Query 72053 GAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTC 72099
||| ||||| ||||| | ||||| || || || |||||| ||
Sbjct 415758 AAGCATAAAATAATTCTCTTGCTCTATTTTCTTCCTTACCTGTAGTC 415804
>seq967
Length=1612715
Score = 156 bits (172), Expect = 6e-33
Identities = 177/236 (75%), Gaps = 1/236 (0%)
Strand=Plus/Minus
Query 42314 TTTTCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATG 42373
||||| ||| |||| ||| |||||| || ||||| | | ||||||||||||||| |
Sbjct 653259 TTTTC-TTAGCATCTGTAATATATGTGTCAATCAATAAAGAATACATTTCTGAATGTACA 653201
Query 42374 TTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTA 42433
||||| ||||| | ||||| || || ||||| | ||||| || |||||||||||| |
Sbjct 653200 TTTTCCATGGCAACTTGAAAGCCATAAAAACAACGTGCCTCTGTTACCTGTACTTCTTGA 653141
Query 42434 CAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAAT 42493
| |||||||||| | | |||||| || |||||||| ||| || |||||||| || |||
Sbjct 653140 CTAAATCGTTCAACAAGATTTTCATTAACTATTCCATCAGAAGCAGCAAAAAATGCTAAT 653081
Query 42494 ACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATCATTGATATC 42549
||||| |||||||| ||| || | ||||| |||||| ||| |||||
Sbjct 653080 ACATGAGATATAAAATGTTTCTCATTGTCAGTTAAACGATTCCAGTCAAATATATC 653025
Score = 100 bits (110), Expect = 4e-16
Identities = 87/108 (81%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 42551 TTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTC 42610
||||| | || |||||||| || |||||||| ||||| || || |||||||||||||||
Sbjct 652949 TTAGAGAGGTCCACTTCTTCCACTGTCCAAAAAGATGCCTCAGCTTTTTTATACATATTC 652890
Query 42611 CAGATATCATGATATTGAATTGGGAAAATAACAAATCTATTTGGATTT 42658
|| || ||| | ||||||| || |||| |||||| ||| |||||||
Sbjct 652889 CAAATGTCAGGCCATTGAATAGGAAAAACAACAAACCTACGTGGATTT 652842
Score = 93.3 bits (102), Expect = 6e-14
Identities = 161/231 (70%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 41862 TATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATG 41921
|| ||| |||| | | || ||||| || |||||||||||| | ||||| ||||||
Sbjct 653895 TACAAACCTTTTGACAGCCTAATTCTATAAGCAATCTATCTGCAACAAATTCAATATATT 653836
Query 41922 TTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATT 41981
||| | || || ||||| ||||| | || ||| || | ||| | || | |||||
Sbjct 653835 GGCACATAAGTTTGCAGTTCATGCCTATCATTTCAACAGGCAAAGCTTCTGTTAAAAATT 653776
Query 41982 CTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGG-- 42039
|||||||||| ||| || ||| | ||||| ||| | ||| || | |||||
Sbjct 653775 CTTGTTCAATTTTGACAGCATCTTTAATAATTGATGTGACTCGATCCGGA---GGTGGTT 653719
Query 42040 ATACAATAA-ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCT 42089
| |||| ||||| ||||| ||||||||||||||||| || | ||||
Sbjct 653718 TTTGTATAATGTGTTTGAACATTAAACATGCGAAATCGCAATGTAACCCCT 653668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 669565286294360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |