Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq5459 86.0 5e-12 >seq5459 Length=1306269 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 18813 TTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCG 18872 ||||||||| | ||||| |||| ||| | || |||||||| || || || ||||| | Sbjct 706101 TTCCTCCTCTGAGCCTTAGTACCAAGTGGAGAGTTGACTCCTTCTGGATGTTATAATCTG 706160 Query 18873 CCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGG 18932 || ||| | | || ||||||||||| || ||| | || | | |||||||| || Sbjct 706161 ACAAAGTTCTCCCATCTTCCAGCTGTTTCCCAGCAAAGATCAAACGTTGCTGATCAGGGG 706220 Query 18933 GCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCG 18992 | | || || || || ||||| || || | | | ||||| || || Sbjct 706221 GAATTCCTTCCTTATCTTGGATTTTTGCCTTCACATTCTCTATTGTATCAGAAGCTTCTA 706280 Query 18993 TTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATT 19042 ||| | |||||||||||| ||||| | || |||||||| ||||||||| Sbjct 706281 CTTCCAAGGTAATGGTTTTTCCTGTCAGTGTCTTGACAAAGATTTGCATT 706330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 413624875535734