Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09]
187,611 sequences; 596,278,454 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq4862 95.1 8e-15
>seq4862
Length=216935
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202
|||||||| | || | || | ||| | || || |||||||| ||||| ||||||||
Sbjct 39157 CCGCCTCTAAGTCGAAGAACAAGATGGAGAGTAGATTCTTTTTGAATATTATAATCAGAA 39098
Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262
| || | ||| |||||||| |||||| ||| || || | ||| || || | ||
Sbjct 39097 AGTGTGCGACCGTCTTCCAATTGTTTTCCAGCAAAGATCAATCTTTGTTGATCAGGAGGG 39038
Query 33263 ATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACG 33322
|| ||||| || || ||| ||| || ||| |||||| || | || ||
Sbjct 39037 ATCCCTTCCTTATCTTGAATTTTGGCTTTAACATTTTCAATCGTATCAGATGCTTCTACT 38978
Query 33323 TCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
||||| || || || ||||| ||||| || || ||||||||||||||
Sbjct 38977 TCCAGCGTAATAGTCTTTCCAGTAAGTGTCTTGACGAAAATTTGCAT 38931
Score = 93.3 bits (102), Expect = 3e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 33166 ATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTG 33225
||||| || || || ||||| ||||| || || | || | | ||| || |||||
Sbjct 39590 ATGCAGCGTAGATTCCTTTTGAATATTATAGTCGGTCAGTGTACGACCGTCTTCTAATTG 39531
Query 33226 CTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGC 33285
|||||| ||| ||||| | ||| || || | || || ||||| || |||| |||
Sbjct 39530 TTTTCCAGCAAAAATTAATCTTTGTTGATCAGGTGGGATACCTTCCTTATCGCGAATTTT 39471
Query 33286 CTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGT 33345
||| || ||| ||| ||||| | || ||| ||||| ||||| |||||||| ||
Sbjct 39470 AGCTTTAACGTTTTCAATTGTGTCCGATGCTTCAACTTCCAGGGTTATAGTTTTTCCAGT 39411
Query 33346 AAGAGTTTTTACGAAAATTTGCAT 33369
||||| || || |||||||||||
Sbjct 39410 GAGAGTCTTGACAAAAATTTGCAT 39387
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318048712128678
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |