Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq3557 271 4e-68 >seq3557 Length=1130849 Score = 271 bits (300), Expect = 4e-68 Identities = 432/614 (70%), Gaps = 7/614 (1%) Strand=Plus/Plus Query 3529 AGCtttttttATCAACAGAGGTGCTGTAAAAATGGCAAACATTGATCATGCAACGAATTT 3588 ||| ||||| | || | | |||||| ||||||||||| || ||| ||| ||||| Sbjct 998312 AGCATTTTTCTTGAATCGTGCTGCTGTTAAAATGGCAAATATAGATAGAGCATGTAATTT 998371 Query 3589 CGTATTTACACGATT--GAATGAT--GGATCAAATGAATTGATATATTTTGCTGACGTAT 3644 | | ||||| ||| || || | ||| ||||| || ||||||||||||| |||| Sbjct 998372 CATGTTTACTA-ATTCAGACTGTTTGGGAAAGAATGAGCTGTTATATTTTGCTGATGTAT 998430 Query 3645 GCGCTGGTCCAGGTGGTTTCAGTGAATATATGTTATGGAGAAAGAAATGGAATATCAAAG 3704 | |||||||||||||||||||||||||| | ||||||||||| || ||| | |||| Sbjct 998431 GTGCTGGTCCAGGTGGTTTCAGTGAATACGTTTTATGGAGAAAAAAGTGGCACGCTAAAG 998490 Query 3705 GTTATGGTATGACGTTACGCGaaaaaaaTGATTTTCAACTGAACAGATTTTACG-ATAAC 3763 | | |||| | || || | | | |||||||||| |||| | |||| | | | || Sbjct 998491 GATTTGGTTTTACTTTGAGAGGAGAAAATGATTTCAAACTAAGTGAATTTCATGCAGCAC 998550 Query 3764 TTTTCGGAAACTTTACACCCGTATTATGGTCCGCTTAACGATGGTAATATCTACAATTCA 3823 | | ||||||| || ||||||||||| || | ||| || | || || | Sbjct 998551 CCTGTG-AAACTTTTCATCCGTATTATGGACCAGAAGATACTGGAGATGTTTATGATCCT 998609 Query 3824 CAAAATCAGAAAGGTTTTTGTGAAATGATTATGAAAGATACCGAAGGAAAAGGTGTACAT 3883 ||||| ||| ||| | | || |||| | | || | || ||||| |||||| Sbjct 998610 GCTAATCAAGAAGCTTTCAAAAATTTAATAATGACACACACTCACGGTAAAGGAGTACAT 998669 Query 3884 TTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGTTA 3943 ||||||||| |||| || ||||| || || |||||||||||||||| |||||||| | Sbjct 998670 TTTATGATGTCTGATGGAGGGTTTTCTGTAAAGGGTCAAGAAAATATACAAGAAATTCTT 998729 Query 3944 TCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCATACGAATTGGTGGT 4003 || ||| | | ||| | || |||||||| || ||||||||||| | | | ||| Sbjct 998730 TCAAAACAATTATATCTTTGCCAATGTTTGATAGCATTGATGATTGTGAAAGTAAAAGGT 998789 Query 4004 CATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTG 4063 || | ||| | ||| | || ||||| || |||||||| |||||||||||||| || || Sbjct 998790 CACTTTGTCACAAAACTGTTTGATATTTTCACACCTTTCAGTGCTGGTTTAGTTTACTTA 998849 Query 4064 ATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACATTCATCGCGACCGGCCAAT 4123 ||||| | |||| || ||||||||||| |||||| | || || | || || ||| Sbjct 998850 ATGTACCATTGTTTTGATGAGATTTGTATTTTTAAACCAAACTCTTCTAGGCCAGCAAAT 998909 Query 4124 TCTGAAAGATATTT 4137 || ||| | || || Sbjct 998910 TCAGAACGTTACTT 998923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 275921257687333