Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09]
187,611 sequences; 596,278,454 total letters
Query= NC_005905.1
Length=86462
Score E
Sequences producing significant alignments: (Bits) Value
seq3557 271 4e-68
>seq3557
Length=1130849
Score = 271 bits (300), Expect = 4e-68
Identities = 432/614 (70%), Gaps = 7/614 (1%)
Strand=Plus/Plus
Query 3529 AGCtttttttATCAACAGAGGTGCTGTAAAAATGGCAAACATTGATCATGCAACGAATTT 3588
||| ||||| | || | | |||||| ||||||||||| || ||| ||| |||||
Sbjct 998312 AGCATTTTTCTTGAATCGTGCTGCTGTTAAAATGGCAAATATAGATAGAGCATGTAATTT 998371
Query 3589 CGTATTTACACGATT--GAATGAT--GGATCAAATGAATTGATATATTTTGCTGACGTAT 3644
| | ||||| ||| || || | ||| ||||| || ||||||||||||| ||||
Sbjct 998372 CATGTTTACTA-ATTCAGACTGTTTGGGAAAGAATGAGCTGTTATATTTTGCTGATGTAT 998430
Query 3645 GCGCTGGTCCAGGTGGTTTCAGTGAATATATGTTATGGAGAAAGAAATGGAATATCAAAG 3704
| |||||||||||||||||||||||||| | ||||||||||| || ||| | ||||
Sbjct 998431 GTGCTGGTCCAGGTGGTTTCAGTGAATACGTTTTATGGAGAAAAAAGTGGCACGCTAAAG 998490
Query 3705 GTTATGGTATGACGTTACGCGaaaaaaaTGATTTTCAACTGAACAGATTTTACG-ATAAC 3763
| | |||| | || || | | | |||||||||| |||| | |||| | | | ||
Sbjct 998491 GATTTGGTTTTACTTTGAGAGGAGAAAATGATTTCAAACTAAGTGAATTTCATGCAGCAC 998550
Query 3764 TTTTCGGAAACTTTACACCCGTATTATGGTCCGCTTAACGATGGTAATATCTACAATTCA 3823
| | ||||||| || ||||||||||| || | ||| || | || || |
Sbjct 998551 CCTGTG-AAACTTTTCATCCGTATTATGGACCAGAAGATACTGGAGATGTTTATGATCCT 998609
Query 3824 CAAAATCAGAAAGGTTTTTGTGAAATGATTATGAAAGATACCGAAGGAAAAGGTGTACAT 3883
||||| ||| ||| | | || |||| | | || | || ||||| ||||||
Sbjct 998610 GCTAATCAAGAAGCTTTCAAAAATTTAATAATGACACACACTCACGGTAAAGGAGTACAT 998669
Query 3884 TTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGTTA 3943
||||||||| |||| || ||||| || || |||||||||||||||| |||||||| |
Sbjct 998670 TTTATGATGTCTGATGGAGGGTTTTCTGTAAAGGGTCAAGAAAATATACAAGAAATTCTT 998729
Query 3944 TCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCATACGAATTGGTGGT 4003
|| ||| | | ||| | || |||||||| || ||||||||||| | | | |||
Sbjct 998730 TCAAAACAATTATATCTTTGCCAATGTTTGATAGCATTGATGATTGTGAAAGTAAAAGGT 998789
Query 4004 CATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTG 4063
|| | ||| | ||| | || ||||| || |||||||| |||||||||||||| || ||
Sbjct 998790 CACTTTGTCACAAAACTGTTTGATATTTTCACACCTTTCAGTGCTGGTTTAGTTTACTTA 998849
Query 4064 ATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACATTCATCGCGACCGGCCAAT 4123
||||| | |||| || ||||||||||| |||||| | || || | || || |||
Sbjct 998850 ATGTACCATTGTTTTGATGAGATTTGTATTTTTAAACCAAACTCTTCTAGGCCAGCAAAT 998909
Query 4124 TCTGAAAGATATTT 4137
|| ||| | || ||
Sbjct 998910 TCAGAACGTTACTT 998923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 275921257687333
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |