Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq14021 190 3e-44 seq1023 158 2e-34 >seq14021 Length=196696 Score = 190 bits (210), Expect = 3e-44 Identities = 205/269 (76%), Gaps = 2/269 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||| | | | | || ||||| |||||||| ||||| || ||||||||| Sbjct 110046 GCCAAGCGTCATAGGAAGGTTTTGCGTGATAATATCCAAGGTATCACGAAACCAGCTATC 109987 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| |||||||||||||| || |||||| | ||||| || |||| ||||| | Sbjct 109986 CGTCGTCTTGCTCGTCGTGGTGGTGTGAAGCGTATTTCTGGTCTGATCTACGAAGAAACG 109927 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCGA 16611 || | ||| | || | ||||| | | |||||||| ||||||| || || || ||||| Sbjct 109926 CGAGGTGTACTAAAAGTTTTCCTAGAAAACGTTATCCGTGATGCTGTTACA-TACACCGA 109868 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||||||| | ||||| || || | |||||| |||| || || |||||||| ||||| Sbjct 109867 GCACGCTAAAAGGAAGACCGTAACGGCAATGGATGTCGTTTACGCTTTGAAACGCCAAGG 109808 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 | | | | || |||||||| |||||| Sbjct 109807 CAGAACTCTCTACGGTTTTGGTGGTTAAT 109779 Score = 188 bits (208), Expect = 1e-43 Identities = 188/244 (77%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||| |||||||| ||||| || ||||||||||||||||| |||||||||||||| Sbjct 122050 CGTGATAATATCCAAGGTATCACGAAACCAGCTATCCGTCGTCTTGCTCGTCGTGGTGGT 122109 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || |||||| | ||||| || |||| ||||| | ||||| ||| | || | ||||| Sbjct 122110 GTGAAGCGTATTTCTGGTCTGATCTACGAAGAAACTCGTGGTGTACTAAAAGTTTTCCTG 122169 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 | | |||||||| ||||||| | || ||||||||||||||| | ||||| || || Sbjct 122170 GAAAACGTTATCCGTGATGCTGTTACGTACACCGAGCACGCTAAAAGGAAGACCGTAACG 122229 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGT 16696 | ||||| |||| || || |||||||| |||||| | | | || |||||||| || Sbjct 122230 GCAATGGACGTCGTTTACGCTTTGAAACGCCAAGGCAGAACCCTCTACGGTTTTGGTGGT 122289 Query 16697 TAAT 16700 |||| Sbjct 122290 TAAT 122293 >seq1023 Length=1865667 Score = 158 bits (174), Expect = 2e-34 Identities = 195/267 (73%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 |||||||||||| | | | ||||| ||||| |||||||| ||||| || || || || Sbjct 1225961 GCTAAGCGTCATAGAAAAGTACTTCGTGATAATATCCAAGGTATCACGAAACCTGCAATA 1226020 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||| |||||||||||||||| || || ||| | ||||| || | || || || | | Sbjct 1226021 CGTCGATTGGCTCGTCGTGGTGGTGTTAAACGTATATCTGGTTTAATTTACGAGGAAACT 1226080 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| ||||| || | ||| | | | |||||| | ||| || | ||||| || Sbjct 1226081 CGTGGCGTTTTAAAAGTTTTCTTAGAAAACGTTATTCGTGACGCAGTTACGTATACTGAA 1226140 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| ||||| || || || || | |||||| |||| ||||| | ||| | ||||| Sbjct 1226141 CACGCCAAACGGAAAACCGTAACAGCTATGGATGTCGTTTATGCTCTAAAAAGACAAGGA 1226200 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 || | |||||||||||||| ||||| Sbjct 1226201 CGCACACTTTATGGTTTTGGAGGTTAA 1226227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78903665949423