Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq5459 102 8e-17 >seq5459 Length=1306269 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131026 ACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCT 131085 || ||||||| || |||||||| |||||||| ||||| | || | || ||| Sbjct 705893 ACCAAATGTAGTGTTGACTCCTTCTGAATGTTATAATCTGAAAGAGTTCTTCCATCTTCT 705952 Query 131086 AGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTG 131145 | ||| ||||| || |||| || ||||||||||| |||||||||||||||||||| | Sbjct 705953 AACTGTTTGCCAGCAAAGATCAAGCGCTGCTGGTCTGGAGGGATTCCTTCTTTGTCTTGG 706012 Query 131146 ATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTA 131205 || || ||| | | ||| | ||||| | | || | || | ||| | |||||| Sbjct 706013 ATCTTTGCCTTCACATTCTCTATTGTATCAGAAGCTTCTACCTCCAAGGTGATGGTTTTC 706072 Query 131206 CCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || || || ||||| || || ||||| Sbjct 706073 CCTGTGAGGGTCTTTACAAAGATTTGCAT 706101 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131026 ACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCT 131085 || ||||||| || |||||||| || ||||| ||||| | ||| | | || ||| Sbjct 706349 ACCAAATGTAGTGTTGACTCCTTCTGGATGTTATAATCTGAAAGGGTTCTCCCATCTTCT 706408 Query 131086 AGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTG 131145 | || ||||| || |||| |||||||||||||| ||||| |||||||||||||| | Sbjct 706409 AATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATTCCTTCTTTGTCTTGG 706468 Query 131146 ATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTA 131205 |||||| || | | || | ||||| | | || | || | ||||| |||||| Sbjct 706469 ATTTTCGCTTTTACATTTTCTATTGTATCAGAAGCTTCTACCTCCAAGGTAATGGTTTTT 706528 Query 131206 CCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || || || || || || || ||||| Sbjct 706529 CCTGTGAGTGTCTTGACAAAGATTTGCAT 706557 Score = 91.5 bits (100), Expect = 1e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 131026 ACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCT 131085 ||||||||||| || ||||| || |||||||| ||||| | ||| | | || ||| Sbjct 710350 ACTAAATGTATTGTTGACTCTTTCTGAATGTTATAATCTGAAAGGGTTCTCCCATCTTCT 710409 Query 131086 AGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTG 131145 | || ||||| || |||| |||||||||||||| | || |||||| |||||||| | Sbjct 710410 AATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGCAGAGATTCCATCTTTGTCTTGG 710469 Query 131146 ATTTT 131150 ||||| Sbjct 710470 ATTTT 710474 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131025 CACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTC 131084 ||||||||| | || ||||||||||||||||| || || | || | || || Sbjct 709437 CACTAAATGGAGTGTTGACTCCTTTTGAATGTTATAGTCTGAAAGAGTTCTACCATCTTC 709496 Query 131085 TAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGT 131144 || ||| || || || |||| ||||||||| |||| || |||||| |||||||||| Sbjct 709497 TAACTGTTTTCCAGCAAAGATCAAACGCTGCAGGTCAGGTGGGATTTCTTCTTTGTCCTG 709556 Query 131145 GATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTT 131204 |||||| || | | ||| | |||||| | | || | || | | | |||||| Sbjct 709557 GATTTTAGCTTTTAAATTCTCTATAGTATCAGAAGCATCTACCTCCAAAATGATGGTTTT 709616 Query 131205 ACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || || || ||||| || || ||||| Sbjct 709617 TCCAGTCAGTGTCTTTACAAAGATTTGCAT 709646 Score = 86.0 bits (94), Expect = 6e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 131026 ACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCT 131085 ||||||||||| || |||||||| |||||||| |||| | || | | || ||| Sbjct 709894 ACTAAATGTATTGTTGACTCCTTCTGAATGTTAGAATCTGAAAGAGTTCTCCCATCTTCT 709953 Query 131086 AGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTG 131145 | || ||||| || |||| |||||||||||||| | || |||||| |||||||| | Sbjct 709954 AATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGCAGAGATTCCCTCTTTGTCTTGG 710013 Query 131146 ATTTT 131150 ||||| Sbjct 710014 ATTTT 710018 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131026 ACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCT 131085 || |||||||| || |||||||| |||||||| ||||| | || | | || || Sbjct 709666 ACCAAATGTATTGTTGACTCCTTCTGAATGTTATAATCCGAAAGAGTTCTCCCATCTTCC 709725 Query 131086 AGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTG 131145 | || ||||| || |||| |||||||||||||| || |||||| |||||||| | Sbjct 709726 AATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTACAGAGATTCCATCTTTGTCTTGG 709785 Query 131146 ATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTA 131205 ||||| || | | ||| | ||||| | | || | || | ||| | |||||| Sbjct 709786 ATTTTAGCTTTTACATTCTCTATTGTATCAGAAGCTTCTACCTCCAAGGTGATGGTTTTT 709845 Query 131206 CCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || ||||| || || || ||||| Sbjct 709846 CCTGACAGTGTTTTGACAAAGATTTGCAT 709874 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131026 ACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCT 131085 || ||||| | || |||||||| |||||||| ||||| | ||| | || ||| Sbjct 710578 ACCAAATGGAGTGTTGACTCCTTCTGAATGTTATAATCTGAAAGGGTTCTTCCATCTTCT 710637 Query 131086 AGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTG 131145 ||||| || || || |||| || || ||||| || || | ||||||||||| || | Sbjct 710638 AGCTGTTTCCCAGCAAAGATCAATCGTTGCTGATCAGGGAGAATTCCTTCTTTATCTTGG 710697 Query 131146 ATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTA 131205 || || ||| | | ||| | ||||| | | || | || | ||| | ||||| Sbjct 710698 ATCTTTGCCTTCACATTCTCTATTGTATCAGAAGCTTCTACCTCCAAGGTGATAGTTTTC 710757 Query 131206 CCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || || || || || ||||||||||||||| Sbjct 710758 CCTGTGAGGGTCTTAACGAAAATCTGCATG 710787 Score = 82.4 bits (90), Expect = 7e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || ||||||||||| ||||| ||||| | ||| | || |||| ||| ||||| Sbjct 721341 GTTGACTCCTTTTGGATGTTATAATCTGAAAGGGTTCTTCCATCTTCTAACTGTTTGCCA 721400 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTT 131150 ||| |||| ||||| ||||| || || ||||||||||||||||| |||||| Sbjct 721401 GCGAAGATCAAACGTTGCTGATCAGGTGGGATTCCTTCTTTGTCTTGGATTTT 721453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470905865082240