Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_008950.1 Length=5254 Score E Sequences producing significant alignments: (Bits) Value seq646 98.7 3e-17 >seq646 Length=1935229 Score = 98.7 bits (108), Expect = 3e-17 Identities = 157/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 1452 CCGCATTACATGTGGAAATCTTGGGAGGGAGGAAAACTGAAGATGTTGACCGTCGAGCTC 1511 |||| |||| |||||||| |||||||||| || ||| | ||||||||| |||| || Sbjct 1669793 CCGCGTTACCTGTGGAAAACTTGGGAGGGCGGTAAAATAAAGATGTTGGTTCTCGACCTA 1669852 Query 1512 ACATCACCCGTTTTACGCAAAGATTGCATAAAAGAAAACACAGAACCATTGATCGATTAC 1571 | | || || | || | || || | | |||| | | || |||| |||| ||| Sbjct 1669853 AATTGCCCTGTGATGAGCGACGAATGTAAATCGGAAAGGAGAAAATTATTGGTCGACTAC 1669912 Query 1572 TTCTGTTCGACACTT-CATTCGCACAACAGTTATGCCTACAAATATTTTTTCTGTGAAAT 1630 ||| || | ||| |||||||| ||| |||||| | | || ||| |||||||| | Sbjct 1669913 TTCGCGTCAA-ACTGGCATTCGCAAAACTTTTATGCATTCCGATTTTTCCTCTGTGAAGT 1669971 Query 1631 GTTGAATTTCATTAACGCCGTGGGACAAATATGTTTCATGAAT 1673 | ||||||||||||||| || || ||||| | || ||| || Sbjct 1669972 GCTGAATTTCATTAACGTGGTCGGCCAAATCTACTTTATGGAT 1670014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16666530036685