Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09]
187,611 sequences; 596,278,454 total letters
Query= NC_008950.1
Length=5254
Score E
Sequences producing significant alignments: (Bits) Value
seq646 98.7 3e-17
>seq646
Length=1935229
Score = 98.7 bits (108), Expect = 3e-17
Identities = 157/223 (70%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 1452 CCGCATTACATGTGGAAATCTTGGGAGGGAGGAAAACTGAAGATGTTGACCGTCGAGCTC 1511
|||| |||| |||||||| |||||||||| || ||| | ||||||||| |||| ||
Sbjct 1669793 CCGCGTTACCTGTGGAAAACTTGGGAGGGCGGTAAAATAAAGATGTTGGTTCTCGACCTA 1669852
Query 1512 ACATCACCCGTTTTACGCAAAGATTGCATAAAAGAAAACACAGAACCATTGATCGATTAC 1571
| | || || | || | || || | | |||| | | || |||| |||| |||
Sbjct 1669853 AATTGCCCTGTGATGAGCGACGAATGTAAATCGGAAAGGAGAAAATTATTGGTCGACTAC 1669912
Query 1572 TTCTGTTCGACACTT-CATTCGCACAACAGTTATGCCTACAAATATTTTTTCTGTGAAAT 1630
||| || | ||| |||||||| ||| |||||| | | || ||| |||||||| |
Sbjct 1669913 TTCGCGTCAA-ACTGGCATTCGCAAAACTTTTATGCATTCCGATTTTTCCTCTGTGAAGT 1669971
Query 1631 GTTGAATTTCATTAACGCCGTGGGACAAATATGTTTCATGAAT 1673
| ||||||||||||||| || || ||||| | || ||| ||
Sbjct 1669972 GCTGAATTTCATTAACGTGGTCGGCCAAATCTACTTTATGGAT 1670014
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 16666530036685
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |