Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq5123 91.5 1e-13 >seq5123 Length=351926 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 20243 GTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCC 20302 |||| ||| || ||||| | ||||| || |||| ||||| ||||| || ||||| Sbjct 332744 GTAATATGTGCCAGCATGTGAGTTAGTAGACAATAAGATGCAATATTAAATGGTACTCCA 332685 Query 20303 AAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAA 20362 | |||||| ||| | || ||||| || ||||| || | ||| ||| |||||| Sbjct 332684 AGACCCATATCTGCACTTCTTTGATAAAGTTGACATGATAACTCTTTATCATTCACATAA 332625 Query 20363 AATTG-ACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCA 20421 ||||| ||| || |||||||||| || || ||||| || | || || || ||||| Sbjct 332624 AATTGAACAAGAC-AGTGACAGGGAGGTAGGGCCATTTGTGAAATATCAGCTGGATTCCA 332566 Query 20422 CGCACACATAATGATTCTTCTATC 20445 ||| ||| || |||||||| || Sbjct 332565 TGCAGTCATTATAATTCTTCTGTC 332542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440337720095240