Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq24318 100 2e-16 seq5459 86.0 5e-12 seq3247 86.0 5e-12 >seq24318 Length=3129 Score = 100 bits (110), Expect = 2e-16 Identities = 80/93 (86%), Gaps = 4/93 (4%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAG--TAAGATCTAAGGAA 114389 |||||||| |||||||||||||||| ||||||||||||| || | || |||||||| || Sbjct 188 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTGGGTACGATCTAAGAAA 247 Query 114390 CCAAAACTGATATATTGAGCCATTCGTGGTATC 114422 ||| ||||||| || ||||||||||| ||| || Sbjct 248 CCATAACTGATTTAATGAGCCATTCGCGGTTTC 280 Score = 100 bits (110), Expect = 2e-16 Identities = 80/93 (86%), Gaps = 4/93 (4%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAG--TAAGATCTAAGGAA 115586 |||||||| |||||||||||||||| ||||||||||||| || | || |||||||| || Sbjct 188 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTGGGTACGATCTAAGAAA 247 Query 115587 CCAAAACTGATATATTGAGCCATTCGTGGTATC 115619 ||| ||||||| || ||||||||||| ||| || Sbjct 248 CCATAACTGATTTAATGAGCCATTCGCGGTTTC 280 >seq5459 Length=1306269 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || ||||| || | || |||| ||| | || ||||||||||||||| ||||| | Sbjct 709648 CCACCTCTGAGTCTCAATACCAAATGTATTGTTGACTCCTTCTGAATGTTATAATCCGAA 709707 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || | | || |||||||| ||||| ||||| |||| |||||||| || || | Sbjct 709708 AGAGTTCTCCCATCTTCCAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTACAGAG 709767 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCGCA 34079 | | ||||||| | | |||| |||| ||| | |||||| || ||| Sbjct 709768 ATTCCATCTTTGT-CTTGGATTTTAGCTTTTACATTCTCTATTGTATCAGAAGCTTCTAC 709826 Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 || | || || |||||||| | |||||||| ||||||||||||||| Sbjct 709827 CTCCAAGGTGATGGTTTTTCCTGACAGTGTTTTGACAAAGATTTGCATT 709875 >seq3247 Length=73488 Score = 86.0 bits (94), Expect = 5e-12 Identities = 77/93 (83%), Gaps = 4/93 (4%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACT--GAGTAAGATCTAAGGAA 114389 |||||||| || || ||||||||| ||||||||||||| | | ||||||||||||||| Sbjct 62628 CATGTATTAGCCCTGGAATTACCAGAGTTATCCAAGTAAATTTGGGTAAGATCTAAGGAA 62687 Query 114390 CCAAAACTGATATATTGAGCCATTCGTGGTATC 114422 ||| ||| ||| || |||| |||||| ||| || Sbjct 62688 CCATAACCGATTTAATGAGACATTCGCGGTTTC 62720 Score = 86.0 bits (94), Expect = 5e-12 Identities = 77/93 (83%), Gaps = 4/93 (4%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACT--GAGTAAGATCTAAGGAA 115586 |||||||| || || ||||||||| ||||||||||||| | | ||||||||||||||| Sbjct 62628 CATGTATTAGCCCTGGAATTACCAGAGTTATCCAAGTAAATTTGGGTAAGATCTAAGGAA 62687 Query 115587 CCAAAACTGATATATTGAGCCATTCGTGGTATC 115619 ||| ||| ||| || |||| |||||| ||| || Sbjct 62688 CCATAACCGATTTAATGAGACATTCGCGGTTTC 62720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396154513224022