Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq1891 93.3 3e-14 >seq1891 Length=238549 Score = 93.3 bits (102), Expect = 3e-14 Identities = 99/128 (77%), Gaps = 2/128 (2%) Strand=Plus/Minus Query 108464 AGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACAC-GACGGCCGACCCACAC 108522 |||||||| || ||||| ||||| ||||||||| | ||||| |||| | || || ||| Sbjct 223178 AGTGGGTGAGGGACCACAGAGTTCATCACAAGTACACGGACACCGACG-CTGATCCCCAC 223120 Query 108523 AACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCC 108582 ||||| || || || |||| ||||||||||| || |||||| || || ||| |||| Sbjct 223119 AACGCGAAGAGAGGATTCTTCTTCTCGCACGTAGGCTGGCTCTTGGTGCGAAAGCACCCG 223060 Query 108583 GACGTGAT 108590 || ||||| Sbjct 223059 GAAGTGAT 223052 Score = 89.7 bits (98), Expect = 4e-13 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 108871 GTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGAC 108930 ||||| | |||||| ||||||||||||||||||| || |||||||||||||| | ||| Sbjct 221840 GTGGCCGTTTTGGCTTTCGGCGAGGGATGGCACAATTATCACCACGTGTTCCCATGGGAC 221781 Query 108931 TACAAGGCCGCCGAGTTGGGGAACGAC 108957 |||||||| || || || || ||| || Sbjct 221780 TACAAGGCTGCTGAATTCGGCAACTAC 221754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380899873032984