Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq4862 93.3 4e-14 seq5459 89.7 5e-13 >seq4862 Length=216935 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||||||||| || |||||| ||| ||||| ||| || | |||||| || | | Sbjct 39580 GATTCCTTTTGAATATTATAGTCGGTCAGTGTACGACCGTCTTCTAATTGTTTTCCAGCA 39521 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 | |||| | ||||| || || || |||||||| || || | || |||| | ||||| Sbjct 39520 AAAATTAATCTTTGTTGATCAGGTGGGATACCTTCCTTATC-GCGAATTTTAGCTTTAAC 39462 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | ||| | ||||| | | || || || | || | ||||| ||||| ||||| || Sbjct 39461 GTTTTCAATTGTGTCCGATGCTTCAACTTCCAGGGTTATAGTTTTTCCAGTGAGAGTCTT 39402 Query 138600 TACAAAAATCTGCAT 138614 |||||||| ||||| Sbjct 39401 GACAAAAATTTGCAT 39387 >seq5459 Length=1306269 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 || |||||||| | ||||||||||||||||||| ||||| | ||| | || Sbjct 709435 AACACTAAATGGAGTGTTGACTCCTTTTGAATGTTATAGTCTGAAAGAGTTCTACCATCT 709494 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || | ||||| || | | |||| | |||||| |||| || || || |||||||||| Sbjct 709495 TCTAACTGTTTTCCAGCAAAGATCAAACGCTGCAGGTCAGGTGGGATTTCTTCTTTGTCC 709554 Query 138523 GTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTT 138582 |||||| |||||| | || | || || | | || ||||| | | | ||| Sbjct 709555 TGGATTTTAGCTTTTAAATTCTCTATAGTATCAGAAGCATCTACCTCCAAAATGATGGTT 709614 Query 138583 TTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || |||||||| || |||||||| || ||||| Sbjct 709615 TTTCCAGTCAGTGTCTTTACAAAGATTTGCAT 709646 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 ||| || ||||||| |||||||||| || ||||| || || | || | | || Sbjct 706345 CAATACCAAATGTAGTGTTGACTCCTTCTGGATGTTATAATCTGAAAGGGTTCTCCCATC 706404 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 || | |||||| || | | |||| | |||||| ||||| ||||| || ||||||||||| Sbjct 706405 TTCTAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATTCCTTCTTTGTC 706464 Query 138522 GGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581 |||||| ||||| | ||| | || || | | || ||||| | || | || Sbjct 706465 TTGGATTTTCGCTTTTACATTTTCTATTGTATCAGAAGCTTCTACCTCCAAGGTAATGGT 706524 Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| || || || || || ||||| || ||||| Sbjct 706525 TTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 706557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495098596435920