Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq5459 93.3 5e-14 >seq5459 Length=1306269 Score = 93.3 bits (102), Expect = 5e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440 ||| |||| ||| | ||| |||||| || || || || || || ||||| | | || Sbjct 705889 CAATACCAAATGTAGTGTTGACTCCTTCTGAATGTTATAATCTGAAAGAGTTCTTCCATC 705948 Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 || | ||| ||||| || || ||||||||||||||||| | || | | || ||||| Sbjct 705949 TTCTAACTGTTTGCCAGCAAAGATCAAGCGCTGCTGGTCTGGAGGGATTCCTTCTTTGTC 706008 Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGT 46560 |||||| ||| | || | | || || | ||| || |||| |||||||| Sbjct 706009 TTGGATCTTTGCCTTCACATTCTCTATTGTATCAGAAGCTTCTACCTCCAAGGTGATGGT 706068 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 ||| || || || || || ||||||||||||||| Sbjct 706069 TTTCCCTGTGAGGGTCTTTACAAAGATTTGCATT 706102 Score = 91.5 bits (100), Expect = 2e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 46382 AACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCG 46441 |||||||| || | || ||||| ||||||||||| || | || || | | || Sbjct 721098 AACACCAGGTGGAGAGTGGATTCCTTCTGGATATTGTAATCCAAAAGTGTTCTTCCATCT 721157 Query 46442 TCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 46501 || ||||| ||||| || || ||||| |||||||| || | || | | ||||| || Sbjct 721158 TCTAGCTGTTTGCCAGCAAAGATCAAACGCTGCTGATCAGGAGGGATTCCTTCCTTATCT 721217 Query 46502 ATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTT 46561 ||||| || | || | | ||||| | ||| || |||| ||||||||| Sbjct 721218 TGTATCTTAGCTTTCACATTCTCTATTGTGTCAGAAGCTTCTACTTCCAAGGTGATGGTT 721277 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 || || ||||| ||||| ||||||||||||||| Sbjct 721278 TTCCCTGTCAGTGTTTTCACAAAGATTTGCATT 721310 Score = 82.4 bits (90), Expect = 9e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| || || || |||| ||| | | || || ||||| || || || || Sbjct 705682 CTCCTTCTGGATGTTATAATCTGATAAAGTTCTTCCATCTTCCAGCTGTTTCCCAGCAAA 705741 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| || ||||| || | || | | ||||| || |||||| ||| | | Sbjct 705742 GATCAAACGTTGCTGATCAGGGGGAATTCCTTCCTTATCTTGGATCTTTGCCTTCACATT 705801 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||| | ||| || |||| || ||||| || || ||||| ||||| || Sbjct 705802 CTCTATTGTGTCAGAAGCTTCTACTTCCAAGGTAATGGTCTTTCCTGTCAGTGTTTTGAC 705861 Query 46582 AAAGATTTGCATT 46594 ||||||||||||| Sbjct 705862 AAAGATTTGCATT 705874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563912838231720