Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq967 100 3e-16 seq5459 89.7 5e-13 >seq967 Length=1612715 Score = 100 bits (110), Expect = 3e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 133186 GAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCC 133245 ||||||||||| || ||||| || |||||||| | ||||||||| ||||| || || ||| Sbjct 653221 GAATACATTTCTGAATGTACATTTTCCATGGCAACTTGAAAGCCATAAAAACAACGTGCC 653162 Query 133246 TCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCG 133305 || ||||| ||||||||| || || || || |||||||| || || || || || Sbjct 653161 TCTGTTACCTGTACTTCTTGACTAAATCGTTCAACAAGATTTTCATTAACTATTCCATCA 653102 Query 133306 CTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGC 133365 || || ||||| || | || || || ||||| ||| ||||| | || || Sbjct 653101 GAAGCAGCAAAAAATGCTAATACATGAGATATAAAATGTTTCTCATTGTCAGTTAAACGA 653042 Query 133366 TCCCAGTC 133373 | |||||| Sbjct 653041 TTCCAGTC 653034 >seq5459 Length=1306269 Score = 89.7 bits (98), Expect = 5e-13 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 38239 aaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGG 38298 |||| ||||| || ||||| || || ||||| || |||||||||||| | || || || | Sbjct 707018 AAAACATGCAGATCTTCGTTAAGACCCTCACAGGAAAAACCATCACCTTGGAGGTAGAAG 706959 Query 38299 CCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358 | | |||| | | | | || | ||| |||| || || || ||||||||| | | Sbjct 706958 CTTCTGACACAATAGAGAATGTGAAGGCAAAGATCCAAGATAAGGAAGGAATTCCCCCTG 706899 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 | || || || | || | || || ||||||||||| || | | ||||| || | Sbjct 706898 ATCAGCAACGTTTGATCTTTGCTGGGAAACAGCTGGAAGATGGAAGAACCCTTTCAGATT 706839 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 | |||||||| ||||| | || || || ||||| || Sbjct 706838 ATAACATCCAGAAGGAGTCAACTCTCCACTTGGTACT 706802 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 38243 aaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| || ||||| || ||||| || |||||||||||| | || || || || | Sbjct 706102 AATGCAAATCTTTGTAAAGACCCTCACAGGGAAAACCATCACCTTGGAGGTAGAAGCTTC 706043 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | | || | ||| |||| |||||||| ||||| || | ||||| Sbjct 706042 TGATACAATAGAGAATGTGAAGGCAAAGATCCAAGACAAAGAAGGAATCCCTCCAGACCA 705983 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | || ||||||||| | || || | | || || || || || Sbjct 705982 GCAGCGCTTGATCTTTGCTGGCAAACAGTTAGAAGATGGAAGAACTCTTTCAGATTATAA 705923 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 ||| || ||||| | || || |||||||| Sbjct 705922 CATTCAGAAGGAGTCAACACTACATTTGGT 705893 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38237 TaaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGA 38296 || ||| ||||| || || || || || | || || ||||||||||| | || || || Sbjct 721544 TACAAACATGCAGATCTTTGTTAAGACATTAACAGGAAAAACCATCACTTTAGAGGTTGA 721485 Query 38297 GGCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGC 38356 || | |||| | ||| | |||| ||||||| |||||||| ||||| || | Sbjct 721484 AGCTTCTGACACAATAGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGAATCCCACC 721425 Query 38357 CGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGA 38416 || || || || | || | ||| ||||||||| | || || | | ||||| || Sbjct 721424 TGATCAGCAACGTTTGATCTTCGCTGGCAAACAGTTAGAAGATGGAAGAACCCTTTCAGA 721365 Query 38417 CTACAACATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 || |||||||||||||| | || || || ||||| Sbjct 721364 TTATAACATCCAAAAGGAGTCAACTCTCCACTTGGT 721329 Score = 82.4 bits (90), Expect = 8e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 38243 aaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| || ||||| || || || || ||||||||||| | || || || || | Sbjct 706786 AATGCAAATCTTTGTAAAGACACTTACAGGAAAAACCATCACTTTGGAGGTAGAAGCTTC 706727 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | | || | ||| |||| || || || ||||||||| | || || Sbjct 706726 TGACACAATAGAGAATGTGAAGGCAAAGATCCAAGATAAGGAAGGAATTCCCCCTGATCA 706667 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || | || | || || ||||||||||| || | | ||||| || || || Sbjct 706666 GCAACGTTTGATCTTTGCTGGGAAACAGCTGGAAGATGGAAGAACCCTTTCAGATTATAA 706607 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||| ||||| | || || || ||||| || Sbjct 706606 CATCCAGAAGGAGTCAACTCTCCACTTGGTACT 706574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498999826010240