Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09]
187,611 sequences; 596,278,454 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq5566 152 6e-32
>seq5566
Length=389603
Score = 152 bits (168), Expect = 6e-32
Identities = 276/393 (70%), Gaps = 8/393 (2%)
Strand=Plus/Plus
Query 154716 GTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGG 154775
|| |||||||| || || || ||||| |||||||||||| |||| ||||| ||
Sbjct 15953 GTCTGTTTGATTCCCATTTCTGCTCATGGTACTAATCCTGCTTCTGCTCAAATGGCCGGT 16012
Query 154776 ATGAAAGTTGTAGG-TGTCA-AGTGTGATGATGATGGTAACATAGACATCAAAGATCTAG 154833
||| |||| | || | || |||| | | || ||| || ||||| | |||||
Sbjct 16013 ATGCAAGT-GAAGCCTATCTTAGTGC-AGAAAGACGGTTCTATGGACATTGCACATCTAA 16070
Query 154834 -AGAAGAAAGCAATCATGAATACATTTGA-ACTGTCATGTATTATGATTACATACCCATC 154891
|||| || ||| | | || || || |||||| ||| | ||||| ||||| |||||
Sbjct 16071 CAGAAACAATAAATAA-GCAT-CAGGAGACACTGTCTTGTTTGATGATAACATATCCATC 16128
Query 154892 TACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGACAATGG 154951
|| ||||||| |||||| | ||||| | || || | || |||||| | |||
Sbjct 16129 GACGAATGGTGTGTTTGAAGAAACGATTAGTGATATTTGCACTATAGTTCATAAAGTTGG 16188
Query 154952 TGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATG 155011
||||| || ||| | |||||||| ||| | ||||| || || ||| || ||| |
Sbjct 16189 AGGTCAAGTGTATTTAGATGGAGCTAATATGAATGCTCAAGTTGGATTATGTCGTCCAGG 16248
Query 155012 TGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGG 155071
||| ||||| ||||| | ||||| || |||||||||||||||||||| || |||||
Sbjct 16249 TGATTATGGCAGTGATGTTTCACATCTGAATTTACATAAAACATTCTGTATACCTCATGG 16308
Query 155072 AGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104
|||||||| ||||| | || ||||| || ||
Sbjct 16309 TGGTGGAGGGCCTGGAATGGGACCTATTGGAGT 16341
Score = 91.5 bits (100), Expect = 2e-13
Identities = 174/251 (69%), Gaps = 9/251 (4%)
Strand=Plus/Plus
Query 153770 AAGGTTTGGTATTCCTA-TGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAG 153828
|| |||| | | ||| | | ||||||||||| |||||||||| ||||||||
Sbjct 14846 AACGTTTCGGAGTCCCACTTGGATATGGAGGACCTCATGCTGGGTTCTTTGCTTGTCGTA 14905
Query 153829 ACAAGTATAAGA--GAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAA-- 153884
| || || || | || ||||| ||||| || ||| || | | | | | ||
Sbjct 14906 AAAA--ATTAGTTCGTTTAATGCCTGGTAGAATGGTCGGT--GTTACGAAAGATTTAAAT 14961
Query 153885 GGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAA 153944
||| | || || || | ||||| || || || | || ||||||||||| |||||||||
Sbjct 14962 GGTCAAAATGCGTATCGCTTAGCCCTTCAAACACGCGAACAGCATATCAGAAGAGACAAA 15021
Query 153945 GCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCA 154004
|| || || || || || || || || ||||| || || |||||||||| | | |||||
Sbjct 15022 GCTACTAGCAATATTTGTACTGCACAAGCACTACTAGCAAATATGTCTGCAATGTATGCT 15081
Query 154005 GCATATCATGG 154015
| ||||||||
Sbjct 15082 GTGTATCATGG 15092
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 577854466342240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |