Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq5566 141 1e-28 >seq5566 Length=389603 Score = 141 bits (156), Expect = 1e-28 Identities = 177/243 (73%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 159537 ACTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAG 159596 |||||| ||| | ||||| ||||||||||| || ||||||| |||||| || || || Sbjct 16099 ACTGTCTTGTTTGATGATAACATATCCATCGACGAATGGTGTGTTTGAAGAAACGATTAG 16158 Query 159597 ACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCT 159656 | || || | || |||||| | ||| ||||| || ||| | ||||| || ||| | Sbjct 16159 TGATATTTGCACTATAGTTCATAAAGTTGGAGGTCAAGTGTATTTAGATGGAGCTAATAT 16218 Query 159657 AAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAA 159716 ||||| || || || || ||| |||| ||||| ||||| | ||||| || Sbjct 16219 GAATGCTCAAGTTGGATTATGTCGTCCAGGTGATTATGGCAGTGATGTTTCACATCTGAA 16278 Query 159717 CTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGG 159776 |||||||| ||||||||||| || ||||| |||||||| ||||| | || |||||||| Sbjct 16279 TTTACATAAAACATTCTGTATACCTCATGGTGGTGGAGGGCCTGGAATGGGACCTATTGG 16338 Query 159777 TGT 159779 || Sbjct 16339 AGT 16341 Score = 96.9 bits (106), Expect = 4e-15 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 158560 GGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAA 158619 ||| | || || || | ||||| || || || | || ||||||||||||||||||||| Sbjct 14962 GGTCAAAATGCGTATCGCTTAGCCCTTCAAACACGCGAACAGCATATCAGAAGAGACAAA 15021 Query 158620 GCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCA 158679 || || || || || || || ||||||||||| || || |||||||||| | ||||| Sbjct 15022 GCTACTAGCAATATTTGTACTGCACAAGCACTACTAGCAAATATGTCTGCAATGTATGCT 15081 Query 158680 GCATATCATGG 158690 | |||||||| Sbjct 15082 GTGTATCATGG 15092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 586672139078960