Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq5123 127 3e-24 >seq5123 Length=351926 Score = 127 bits (140), Expect = 3e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 104865 AAGAATTATTATGGGTGATGAAAGGTTTAACAAATTCTAACTTGTTAAATGAAATTGGTG 104924 ||||||| |||||| | || | || | ||||||| | || ||||| ||||| ||| Sbjct 332199 AAGAATTGTTATGGTTTATTAGGGGATCAACAAATGCAAAAGAGTTAAGTGAAAAAGGTA 332258 Query 104925 TTAAAGTATGGAATGATAATGGTTCACGTAAGTTTTTAGATTCTTGTGGATTTCACTTTC 104984 || | | ||| |||| || | |||||| |||||||||||||| ||| ||| | Sbjct 332259 TTCACATTTGGGATGAAAACAGCTCACGTGTGTTTTTAGATTCTTCTGGTTTTACAGATA 332318 Query 104985 GAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAAT 105044 | ||||||| |||||||| || ||||||||||||||||||||||| ||| || ||| Sbjct 332319 GGGAAGAAGGAGATTTAGGGCCTGTTTATGGATTTCAATGGAGACATTTTGGTGCAAAAT 332378 Query 105045 ATATCGACTGTG-ATACCGACTATACCGGCCAAGGTA 105080 |||| || | || || | || |||| || ||||||| Sbjct 332379 ATATAGA-TATGCATGCAGATTATAATGGGCAAGGTA 332414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 656859153965560