Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09]
187,611 sequences; 596,278,454 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq3181 107 1e-18
seq4862 102 6e-17
seq5459 89.7 4e-13
>seq3181
Length=1038259
Score = 107 bits (118), Expect = 1e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636
||||||||||||||||||| || || | || | || || || ||||| || ||||| |
Sbjct 489040 CTTTTTGAATATTGTAATCTGACAGGGTACGTCCATCTTCTAATTGCTTTCCAGCAAAAA 488981
Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC 48696
| || || |||||||| | |||| ||| || || || || || ||| |||
Sbjct 488980 TGAGACGTTGTTGATCTGGTGGAATGCCTTCTTTATCTTGGATTTTAGCTTTCACATTTT 488921
Query 48697 CCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAA 48756
| | || ||||| | || || || | || || ||||| |||||||||||||| ||||
Sbjct 488920 CAATAGTATCTGATGATTCTACTTCAAGGGTGATGGTTTTACCCGTCAAAGTTTTCACAA 488861
Query 48757 AAATCTGCATCGTG 48770
| ||||||||||||
Sbjct 488860 ATATCTGCATCGTG 488847
>seq4862
Length=216935
Score = 102 bits (112), Expect = 6e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635
|||||||||||||| |||||||| || | ||| | || || | ||| ||||||||||||
Sbjct 40489 TCTTTTTGAATATTATAATCAGAAAGCGTGCGACCATCTTCTAGCTGTTTACCGGCAAAT 40430
Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695
|||| || ||| ||||| | |||| || ||||| || ||| || ||| |||
Sbjct 40429 ATCAATCTCTGCTGATCTGGTGGAATACCTTCCTTATCTTGAATTTTGGCTTTAACATTT 40370
Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755
| | | || || || || || || | |||||| || ||||| || | || || |||
Sbjct 40369 TCAATCGTATCAGAGGCTTCTACTTCGAGCGTAATAGTCTTTCCAGTAAGGGTCTTGACA 40310
Query 48756 AAAATCTGCAT 48766
||||| |||||
Sbjct 40309 AAAATTTGCAT 40299
Score = 95.1 bits (104), Expect = 9e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
||||| || || || | || | ||| || || |||||||||||||| ||||||||
Sbjct 39157 CCGCCTCTAAGTCGAAGAACAAGATGGAGAGTAGATTCTTTTTGAATATTATAATCAGAA 39098
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
|| | ||| |||| ||||| || || || ||||| |||| || |||||||| | ||
Sbjct 39097 AGTGTGCGACCGTCTTCCAATTGTTTTCCAGCAAAGATCAATCTTTGTTGATCAGGAGGG 39038
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| || ||||| || ||| || ||| ||| | | | || || || || ||
Sbjct 39037 ATCCCTTCCTTATCTTGAATTTTGGCTTTAACATTTTCAATCGTATCAGATGCTTCTACT 38978
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|||| |||||| || ||||| || | || || || ||||| |||||
Sbjct 38977 TCCAGCGTAATAGTCTTTCCAGTAAGTGTCTTGACGAAAATTTGCAT 38931
Score = 93.3 bits (102), Expect = 3e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635
|||||||||||||| ||||| || || | ||| | || || ||||| || || |||||
Sbjct 38893 TCTTTTTGAATATTATAATCTGAAAGCGTGCGACCATCTTCTAACTGTTTTCCAGCAAAG 38834
Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695
||||||| |||||||| | |||| || ||||| || ||| || ||| |||
Sbjct 38833 ATCAGTCTTTGTTGATCAGGTGGAATACCTTCCTTATCTTGAATTTTGGCTTTAACATTT 38774
Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755
| | | || || || || || || | |||||| || ||||| || | || || |||
Sbjct 38773 TCAATCGTATCAGATGCTTCTACTTCGAGCGTAATAGTCTTTCCAGTAAGGGTCTTGACA 38714
Query 48756 AAAATCTGCAT 48766
||||| |||||
Sbjct 38713 AAAATTTGCAT 38703
Score = 93.3 bits (102), Expect = 3e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635
|||||||||||||| ||||| || || | ||| | || || ||||| || || |||||
Sbjct 39805 TCTTTTTGAATATTATAATCTGAAAGCGTGCGACCATCTTCTAACTGTTTTCCAGCAAAG 39746
Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695
||||||| |||||||||| |||| || || || || ||| || ||| |||
Sbjct 39745 ATCAGTCTTTGTTGATCCGGTGGAATACCTTCTTTATCTTGAATTTTGGCTTTAACATTT 39686
Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755
| | | || || || || || || | |||||| || ||||| || | || || |||
Sbjct 39685 TCAATCGTATCAGAGGCTTCTACTTCGAGCGTAATAGTCTTTCCAGTAAGGGTCTTGACA 39626
Query 48756 AAAATCTGCAT 48766
||||| |||||
Sbjct 39625 AAAATTTGCAT 39615
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635
|||||||||||||| || || || || | ||| | || || || || ||||| |||||
Sbjct 34562 TCTTTTTGAATATTATAGTCGGAAAGCGTACGACCATCTTCTAATTGTTTACCAGCAAAG 34503
Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695
|||| || |||||||| | || | || ||||| || ||| || ||| ||
Sbjct 34502 ATCAATCTTTGTTGATCAGGTGGGATACCTTCCTTATCTTGAATTTTAGCTTTAACGTTT 34443
Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755
| | | ||||| ||||| ||||| | || || ||||| || |||| ||||||||
Sbjct 34442 TCAATTGTATCTGATGCCTCAACCTCGAGGGTTATTGTTTTGCCTGTCAGTGTTTTTACG 34383
Query 48756 AAAATCTGCAT 48766
|| ||||||||
Sbjct 34382 AAGATCTGCAT 34372
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635
|||||||||||||| || ||||| || | ||| | || || || || || || |||||
Sbjct 40033 TCTTTTTGAATATTATAGTCAGAAAGCGTACGACCATCTTCTAATTGTTTTCCAGCAAAG 39974
Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695
||||||| |||||||||| |||| || || || || ||| || ||| |||
Sbjct 39973 ATCAGTCTTTGTTGATCCGGTGGAATACCTTCTTTATCTTGAATTTTGGCTTTAACATTT 39914
Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755
| | | || || || || || |||| |||||| || ||||| || | || || ||
Sbjct 39913 TCAATCGTATCAGAGGCTTCTACTTCCAGCGTAATAGTCTTTCCAGTAAGTGTCTTGACG 39854
Query 48756 AAAATCTGCAT 48766
||||| |||||
Sbjct 39853 AAAATTTGCAT 39843
>seq5459
Length=1306269
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
|| ||||| || | ||| ||||||||||| || ||| || ||||| || ||||| ||
Sbjct 705875 CCCCCCCTGAGTCTCAATACCAAATGTAGTGTTGACTCCTTCTGAATGTTATAATCTGAA 705934
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
||| ||| | || || ||||| || || ||||| |||| ||||| || || | ||
Sbjct 705935 AGAGTTCTTCCATCTTCTAACTGTTTGCCAGCAAAGATCAAGCGCTGCTGGTCTGGAGGG 705994
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| || || ||||| |||||| || ||| | | | || || || || |||
Sbjct 705995 ATTCCTTCTTTGTCTTGGATCTTTGCCTTCACATTCTCTATTGTATCAGAAGCTTCTACC 706054
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|||| || || ||||| || || | || |||||||| || |||||
Sbjct 706055 TCCAAGGTGATGGTTTTCCCTGTGAGGGTCTTTACAAAGATTTGCAT 706101
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380066582725353
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |