Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq731 143 1e-29 >seq731 Length=568950 Score = 143 bits (158), Expect = 1e-29 Identities = 216/305 (71%), Gaps = 8/305 (3%) Strand=Plus/Plus Query 25999 ATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGC 26058 ||| ||||| |||||||| || ||||||||||||| ||||||||||||| ||| ||||| Sbjct 415903 ATTTTTTTTAAGATCTAAAAATTCAAAAATATCTGCATGCCATGGTTCTACATATATAGC 415962 Query 26059 AAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAAC 26118 ||| ||| |||||| |||||||||||| || |||| || || | ||| | || Sbjct 415963 AAATGCTCCTGGTCTTTTATTTCCACCTTGATCAACATATCGCGCTGTATTATTATATAC 416022 Query 26119 TTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGT----GCTATGAATCTTGGATC 26174 | | | ||| |||| || ||| | || | || ||| ||||| | || | | Sbjct 416023 TCTGATCATAGGAATCAAACCATTAGATACACCAAGTGTACCAGCTAT---TGGTGTA-C 416078 Query 26175 CTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTG 26234 || | | || |||| || ||| || || || ||||||||| |||| |||| || Sbjct 416079 CTCTTGCTCGAATACAATGTACATTAAGTCCAATACCACCAGCCGATTTACTAATAAGTG 416138 Query 26235 CACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAA 26294 |||| | | | ||||| | ||||||| ||||||||| ||| |||| |||||||| Sbjct 416139 CACACTTTTTTAATGTATTATATATTCCTTCAATGCTATCATCTTCCATTGTTAATAAAA 416198 Query 26295 AACAA 26299 ||||| Sbjct 416199 AACAA 416203 Score = 127 bits (140), Expect = 1e-24 Identities = 176/242 (73%), Gaps = 11/242 (5%) Strand=Plus/Plus Query 24944 TTCAATCT-CATATTCGGTGTCCAAAGATTAATTTTTTCA---AGATCTCTAATCAAGTG 24999 |||| ||| ||||| | |||||||||| | ||||| | ||||| | ||| || Sbjct 414513 TTCATTCTTCATATCCTCATTCCAAAGATT---TCTTTCAGTTAAATCTCGCAACAAATG 414569 Query 25000 TTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGA--AGTG 25057 ||||| ||| ||| ||||| ||||||||||||||| | |||| | | | || Sbjct 414570 AGGATTTACGATTTGAAACTCTCCTGACAAAACTCTTCTTGT--ATAAATATTACTGGTA 414627 Query 25058 AATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAAT 25117 ||||||| | | | ||||||||||| || ||||| | |||||||||||||||||| | Sbjct 414628 TATGGTTCTATAGACTCATTATTTCCCAAAATTTGTGCAGTAGATGCTGTTGGCATAGGT 414687 Query 25118 GCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAA 25177 || |||| || ||||||| | ||||| |||| |||| | | ||||||| | | |||| Sbjct 414688 GCAATTAGTAAAGAATTTCGAATACCATGTTTAGCAATTTTTGCTTTTAATGTTTTCCAA 414747 Query 25178 TC 25179 || Sbjct 414748 TC 414749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252461421746825