Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq5566 145 9e-30 >seq5566 Length=389603 Score = 145 bits (160), Expect = 9e-30 Identities = 178/243 (73%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || |||||||| || | ||||| |||||||| ||||| || ||||||||||| |||||| Sbjct 16341 ACTCCAATAGGTCCCATTCCAGGCCCTCCACCACCATGAGGTATACAGAATGTTTTATGT 16282 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 ||||| ||||| | ||||| ||||| |||| ||| || || || || ||| Sbjct 16281 AAATTCAGATGTGAAACATCACTGCCATAATCACCTGGACGACATAATCCAACTTGAGCA 16222 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | ||| || ||||| | ||| || ||||| ||| | |||||| || | || || Sbjct 16221 TTCATATTAGCTCCATCTAAATACACTTGACCTCCAACTTTATGAACTATAGTGCAAATA 16162 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 | || || || |||||| ||||||| |||||||||||||| ||||| | ||| || Sbjct 16161 TCACTAATCGTTTCTTCAAACACACCATTCGTCGATGGATATGTTATCATCAAACAAGAC 16102 Query 138423 AGT 138425 ||| Sbjct 16101 AGT 16099 Score = 105 bits (116), Expect = 8e-18 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 139272 CCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATG 139331 |||||||| | ||||| | | ||||||||||||| || ||||||||||| || || || Sbjct 15092 CCATGATACACAGCATACATTGCAGACATATTTGCTAGTAGTGCTTGTGCAGTACAAATA 15033 Query 139332 TTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAA 139384 || || || |||||||||||||| |||||||| || | ||||| || ||||| Sbjct 15032 TTGCTAGTAGCTTTGTCTCTTCTGATATGCTGTTCGCGTGTTTGAAGGGCTAA 14980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577640569139720