Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09]
187,611 sequences; 596,278,454 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq10194 107 6e-18
seq523 96.9 1e-14
seq34950 93.3 1e-13
seq5841 93.3 1e-13
seq967 89.7 2e-12
seq731 89.7 2e-12
>seq10194
Length=387616
Score = 107 bits (118), Expect = 6e-18
Identities = 125/166 (75%), Gaps = 2/166 (1%)
Strand=Plus/Minus
Query 106924 CATACCATAGAAAAACTTGAACTTTTTACCATCTTCCTCAATTAACTTACCTGGATTTTC 106983
||||||||| |||| ||||||||||| ||||| | ||||| | | |||| | |||
Sbjct 199785 CATACCATAAAAAAGTTTGAACTTTTTTCCATCCTTTTCAATAATATCACCTCCACATTC 199726
Query 106984 ATCGTGTCCCGCAAAGACACCGCCAACCATTACGAAATCAGCCCCGCCACCGAATGCTTT 107043
||| ||||| ||||| | ||| || |||||||| ||||| || || |||| || |||||
Sbjct 199725 ATCATGTCCAGCAAACATACCACCTACCATTACAAAATCTGCTCCAGCACCAAAAGCTTT 199666
Query 107044 AGCCATATCACCAGGGCAAGTAATTCCACCATCACTAATAATATAA 107089
|| | |||||| || ||||| || ||||| |||| |||| ||
Sbjct 199665 TGCTAAATCACCTGGACAAGTGCAACCGCCATC-CTAA-AATAAAA 199622
>seq523
Length=403916
Score = 96.9 bits (106), Expect = 1e-14
Identities = 133/181 (73%), Gaps = 4/181 (2%)
Strand=Plus/Plus
Query 252505 GGGTAAGATAGAACATATGCTGTCTTATCCATCCTATTATCATAATTTGTAACATACATA 252564
|||||| ||||||||| ||| ||||||| | | || | ||||||||| ||| |
Sbjct 71100 GGGTAATATAGAACATGAGCTAAAGTATCCATTCGAACATGAAAATTTGTAATATATACT 71159
Query 252565 CCAAGCGCCTGCTTTCCCATAGCACTCTGGTAAGTATTTCTGGGAGACTGATTGTTTTCC 252624
|| | || || || ||||||||||| || ||||||||||| ||| ||||||| ||
Sbjct 71160 CCCATAGCTTGTTTACCCATAGCACTTTGATAAGTATTTCTTGGACTTTGATTGTGATCA 71219
Query 252625 GGGAAAGGAATGCATGATGCTACA-ACACCGAAGAT-AGTGCTTGGGTGAATTTCACAGT 252682
|| || ||||| ||| || ||| || || | || | ||| ||| |||||||||||||
Sbjct 71220 GGAAATGGAATAATTGAAGC-ACACACTCCTAGTATCATTGC-TGGATGAATTTCACAGT 71277
Query 252683 G 252683
|
Sbjct 71278 G 71278
Score = 89.7 bits (98), Expect = 2e-12
Identities = 142/201 (71%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 251845 ATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCATCA 251904
||||||||||| ||||||||||| ||||| || || ||||| ||| | || || |||
Sbjct 70186 ATAGTCATACGTGATGGAATAGCATGAGGATTAATTATAATGTCTGGTGTAAGACCTTCA 70245
Query 251905 GCAGTGAAGGGCATATCCTTTTCCTCAATAATG-TTTCCAATAGTTCCCTTTTGTCCGTG 251963
| || |||||||| | || | | ||| || ||||| ||| || || || |||||
Sbjct 70246 CATGAAAATGGCATATCTTCTTGC-CTATATTGAATTCCACAAGTACCTTTCTGACCGTG 70304
Query 251964 ACGAGAACTGAACTTATCACCAATAACAGGACGGCGAACACTACGAAGGCGAACCTTACA 252023
||| ||| || ||||||||||| ||| |||||||| || | | | |||||
Sbjct 70305 ACGTGAAGCAAATTTATCACCAATTTGTGGAATACGAACACTGCGTACCCTTATTTTACA 70364
Query 252024 GAAGTTGTAACCATCACCGTT 252044
|| || || || |||| |||
Sbjct 70365 AAATTTATATCCCTCACTGTT 70385
>seq34950
Length=207655
Score = 93.3 bits (102), Expect = 1e-13
Identities = 119/163 (73%), Gaps = 6/163 (4%)
Strand=Plus/Minus
Query 233271 TAGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCAT 233330
||||||||| |||||| ||| || |||||||||||||| | || | |||||| || |
Sbjct 186196 TAGCACCGTACCCAATCAAACAGTCTCGTTCCATTTCACCTAATCGTAAACCACCCTCTT 186137
Query 233331 TTGACCTACCCTGGACTGT---TTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGAT 233387
| | | ||| | |||| |||||| ||||| |||| ||| || || ||||||||
Sbjct 186136 TGGCTCGACCTT---CTGTCGGTTGACGTGTTAATACAGCTCTCGGTCCTCGAGCACGAG 186080
Query 233388 AATTAATTTTATCTTTAACCATATGCTTCAGTCTCATATAATA 233430
|| ||||| |||| |||||||| |||| | | ||||||
Sbjct 186079 CATGCATTTTGTCTTGTACCATATGTTTCAATTTTTGATAATA 186037
>seq5841
Length=940276
Score = 93.3 bits (102), Expect = 1e-13
Identities = 182/269 (68%), Gaps = 0/269 (0%)
Strand=Plus/Minus
Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634
|||||| ||| ||||||||||| ||||| ||||||||| | |||||||| || |||
Sbjct 722607 TCCATAGCCTTTATTAAACGACGTTGAATGTAACCAGTTTCTGCAGTTTTTACGGCAGTA 722548
Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCC 302694
|| || ||||| ||||||| |||||||| || || | | || || | ||
Sbjct 722547 TCGATAAGACCCTCACGACCTCCCATAGCGTGAAAATAAAATTCAGATGGAGTCAAACCA 722488
Query 302695 CCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAG 302754
||| | | ||| |||| ||||| || | | || || || || ||| ||||
Sbjct 722487 GCAAGATACGAGTTCTCGACGAATCCTCTGGATTCAGGACCATAATCATCCTTAATAAAA 722428
Query 302755 TGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGT 302814
||||||| || || || | || | || ||||| || || || ||||| || |||
Sbjct 722427 TGTGGCAATGTTCTTTTACGGAAACCAAACGGAATACGTTTACCTTCTACGTTTTGTTGT 722368
Query 302815 CCCAGGCACGAAATCATCTGCGAAATATT 302843
|| | ||| | ||| | ||| || |||||
Sbjct 722367 CCGACGCAAGCAATAACCTGAGAGATATT 722339
Score = 86.0 bits (94), Expect = 2e-11
Identities = 130/183 (71%), Gaps = 9/183 (5%)
Strand=Plus/Minus
Query 303616 GATTCTTCATC--TTGGGGCATATGTAAATTCATCTCATCACCGTCAAAATCAGCATTAT 303673
|| ||| |||| ||| || | ||| |||||||| ||||| |||||||||||||| ||||
Sbjct 721535 GAGTCTCCATCGATTGCGGTACATGCAAATTCATTTCATCTCCGTCAAAATCAGCGTTAT 721476
Query 303674 ACGGCTTTGTGTCCGCAACGTTCATCCGGAAAGTATCACCCTGCATCATAACAC--GGGC 303731
| || ||| || ||||| ||||| ||| || ||| ||| || |
Sbjct 721475 ATGGTGATGTACAACTAAGATTCATACGGAATGTA-----CTCCATGGTAAAACTTTCAC 721421
Query 303732 TTTATGACACATCATAGACATTCTGTGTAGAGTTGGCTGACGATTGAAAAGCACGGGGTC 303791
| | |||| ||||||| ||| |||| |||||||| ||||||||||||| || | ||
Sbjct 721420 TCTGTGACCCATCATACTCATCTTGTGCAGAGTTGGTTGACGATTGAAAATTACCAGATC 721361
Query 303792 ACC 303794
|||
Sbjct 721360 ACC 721358
>seq967
Length=1612715
Score = 89.7 bits (98), Expect = 2e-12
Identities = 137/190 (72%), Gaps = 4/190 (2%)
Strand=Plus/Plus
Query 133450 AAAGAAATCTGACTGGGCTATTAAAT-GGATCCAGGACAAGCGTGCGAGTTTTGCTACTC 133508
||||||| || ||||||| ||||||| |||| || | |||||| ||| || |
Sbjct 653372 AAAGAAAGCTAACTGGGC-ATTAAATTGGATTACTCACGAAAGTGCGACCTTTCCTGAGC 653430
Query 133509 GTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCT-CTATT 133567
|| | ||||| ||||||| ||||| || ||||| || ||||| ||| |||| ||||
Sbjct 653431 GTGTGGTTGCATTTGCTGCGGTAGAAGGTATTTTCTTTAGTGGCA-GTTTTGCTGCTATA 653489
Query 133568 TTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCA 133627
|| ||||| || || | ||| | | || ||||| ||| ||| |||||||||||
Sbjct 653490 TTCTGGCTAAAGAAAAGAGGTCTAATGCCAGGACTTACATTTAGTAATGAACTTATTTCT 653549
Query 133628 AGGGACGAGG 133637
|| |||||||
Sbjct 653550 AGAGACGAGG 653559
>seq731
Length=568950
Score = 89.7 bits (98), Expect = 2e-12
Identities = 191/283 (67%), Gaps = 3/283 (1%)
Strand=Plus/Plus
Query 155994 AGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAA-CTACC 156052
|| ||||| ||||| |||||| | ||| ||| || | ||| |||||||| || |
Sbjct 415913 AGATCTAAAAATTCAAAAATATCTGCATGCCATGGTTCTACATATATAGCAAATGCTCCT 415972
Query 156053 ATTCCTCT--TGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATA 156110
|| | | | ||||| ||||| ||||| || || || ||||| | || | | ||||
Sbjct 415973 GGTCTTTTATTTCCACCTTGATCAACATATCGCGCTGTATTATTATATACTCTGATCATA 416032
Query 156111 GGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACA 156170
||||| | |||||| || ||| || || || | | ||| || |||| |
Sbjct 416033 GGAATCAAACCATTAGATACACCAAGTGTACCAGCTATTGGTGTACCTCTTGCTCGAATA 416092
Query 156171 TTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACA 156230
||| | || |||||||||||||| | | ||||| ||| | || || | ||||
Sbjct 416093 CAATGTACATTAAGTCCAATACCACCAGCCGATTTACTAATAAGTGCACACTTTTTTAAT 416152
Query 156231 GTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTA 156273
||||| | || |||||||| |||||||||||||| || ||
Sbjct 416153 GTATTATATATTCCTTCAATGCTATCATCTTCCATTGTTAATA 416195
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1468279694986907
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |