Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq5459 113 3e-20 >seq5459 Length=1306269 Score = 113 bits (124), Expect = 3e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| || | ||| || |||| ||| | || ||||||||| |||||||| || | Sbjct 706785 TTCCTCCTCTGAGCCTTAGTACCAAGTGGAGAGTTGACTCCTTCTGGATGTTATAATCTG 706844 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | ||| | | |||| ||||| || || || || ||||||| |||||||| || | | Sbjct 706845 AAAGGGTTCTTCCATCTTCCAGCTGTTTCCCAGCAAAGATCAAACGTTGCTGATCAGGGG 706904 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || ||||| || | || ||| || || |||| | ||| || || | Sbjct 706905 GAATTCCTTCCTTATCTTGGATCTTTGCCTTCACATTCTCTATTGTGTCAGAAGCTTCTA 706964 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | || | ||| ||||| ||||| ||||||||||| || |||||||||||| Sbjct 706965 CCTCCAAGGTGATGGTTTTTCCTGTGAGGGTCTTAACGAAGATCTGCATG 707014 Score = 102 bits (112), Expect = 5e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||||||||| | || || |||| ||||| || ||||||||| |||||||| || | Sbjct 705645 TTCCTCCCCTGAGTCTTAGTACCAAGTGAAGAGTTGACTCCTTCTGGATGTTATAATCTG 705704 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 ||| | | |||| ||||| || || || || ||||||| |||||||| || | | Sbjct 705705 ATAAAGTTCTTCCATCTTCCAGCTGTTTCCCAGCAAAGATCAAACGTTGCTGATCAGGGG 705764 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || ||||| || | || ||| || || |||| | ||| || || | Sbjct 705765 GAATTCCTTCCTTATCTTGGATCTTTGCCTTCACATTCTCTATTGTGTCAGAAGCTTCTA 705824 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| ||||||||||| || || || || |||||||| ||||| Sbjct 705825 CTTCCAAGGTAATGGTCTTTCCTGTCAGTGTTTTGACAAAGATTTGCAT 705873 Score = 102 bits (112), Expect = 5e-17 Identities = 169/243 (70%), Gaps = 1/243 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||||||||| | |||| |||| ||| | || |||||| || |||||||| || | Sbjct 721309 TTCCTCCCCTGAGTCTCAATACCAAGTGGAGAGTTGACTCCTTTTGGATGTTATAATCTG 721368 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | ||| | | |||| || | || || || |||||||||| |||||||| || | | Sbjct 721369 AAAGGGTTCTTCCATCTTCTAACTGTTTGCCAGCGAAGATCAAACGTTGCTGATCAGGTG 721428 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || || ||||| | ||||| ||| || | |||| | ||| || || | Sbjct 721429 GGATTCCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCTATTGTGTCAGAAGCTTCAA 721488 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGATAGTGGA-C 34987 | || | || ||||| ||||| || | ||||| ||||||||||||||| | || || | Sbjct 721489 CCTCTAAAGTGATGGTTTTTCCTGTTAATGTCTTAACAAAGATCTGCATGTTTGTAGATC 721548 Query 34988 TAG 34990 ||| Sbjct 721549 TAG 721551 Score = 98.7 bits (108), Expect = 6e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||||||||| | || | |||| || | || ||||||||||||||||| || | Sbjct 705417 TTCCTCCCCTGAGTCTTAATACCAAATGGAGAGTTGATTCCTTCTGAATGTTATAATCTG 705476 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | | | |||| || || || || || || ||||||| |||||||| || | | Sbjct 705477 AAAGAGTCCTCCCATCTTCTAGCTGTTTGCCAGCAAAGATCAAACGTTGCTGATCAGGGG 705536 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || ||||| || | ||| || ||| || |||| || ||| || || | Sbjct 705537 GAATTCCTTCCTTATCTTGTATCTTAGCTTTCACATTCTCTATTGAGTCAGAAGCTTCTA 705596 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| ||||| ||||| || || ||||| |||||||| ||||| Sbjct 705597 CTTCCAAGGTGATGGTTTTTCCTGTCAGTGTCTTAACAAAGATTTGCAT 705645 Score = 98.7 bits (108), Expect = 6e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| ||||| | |||| |||| || | || |||||||||||||||||| || | Sbjct 705873 TTCCCCCCCTGAGTCTCAATACCAAATGTAGTGTTGACTCCTTCTGAATGTTATAATCTG 705932 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | | |||| || | || || || || ||||||| || ||||||||| | | Sbjct 705933 AAAGAGTTCTTCCATCTTCTAACTGTTTGCCAGCAAAGATCAAGCGCTGCTGGTCTGGAG 705992 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || || ||||| | || ||| || || |||| | ||| || || | Sbjct 705993 GGATTCCTTCTTTGTCTTGGATCTTTGCCTTCACATTCTCTATTGTATCAGAAGCTTCTA 706052 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| ||||| || || |||||||||||||||||||| ||||| Sbjct 706053 CCTCCAAGGTGATGGTTTTCCCTGTGAGGGTCTTTACAAAGATTTGCAT 706101 Score = 98.7 bits (108), Expect = 6e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| || | || || |||| ||| | || ||||||||| |||||||| || | Sbjct 706557 TTCCTCCTCTGAGTCTTAGTACCAAGTGGAGAGTTGACTCCTTCTGGATGTTATAATCTG 706616 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | ||| | | |||| ||||| || || || || ||||||| |||||||| || | | Sbjct 706617 AAAGGGTTCTTCCATCTTCCAGCTGTTTCCCAGCAAAGATCAAACGTTGCTGATCAGGGG 706676 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || ||||| || | || ||| || || |||| | ||| || || | Sbjct 706677 GAATTCCTTCCTTATCTTGGATCTTTGCCTTCACATTCTCTATTGTGTCAGAAGCTTCTA 706736 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || ||||| ||||| || || |||||||||||||| ||||| Sbjct 706737 CCTCCAAAGTGATGGTTTTTCCTGTAAGTGTCTTTACAAAGATTTGCAT 706785 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || || | |||| |||| || || || |||||||||||||||||| |||| Sbjct 709646 TTCCACCTCTGAGTCTCAATACCAAATGTATTGTTGACTCCTTCTGAATGTTATAATCCG 709705 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | | | |||| |||| ||| || || || ||||||| || ||||||||| | Sbjct 709706 AAAGAGTTCTCCCATCTTCCAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTACAG 709765 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | || || ||||| | ||||| ||| || |||| | ||| || || | Sbjct 709766 AGATTCCATCTTTGTCTTGGATTTTAGCTTTTACATTCTCTATTGTATCAGAAGCTTCTA 709825 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| ||||| ||||| | || || || |||||||| ||||| Sbjct 709826 CCTCCAAGGTGATGGTTTTTCCTGACAGTGTTTTGACAAAGATTTGCAT 709874 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| || | |||| || | || || || |||||||||||||||| | || | Sbjct 709874 TTCCTCCTCTGAGTCTCAATACTAAATGTATTGTTGACTCCTTCTGAATGTTAGAATCTG 709933 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | | | |||| || | ||| || || || ||||||| || ||||||||| | Sbjct 709934 AAAGAGTTCTCCCATCTTCTAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGCAG 709993 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | ||||| ||||| | ||||| ||| || |||| | ||| || || | Sbjct 709994 AGATTCCCTCTTTGTCTTGGATTTTAGCTTTTACATTCTCTATTGTATCAGAAGCTTCTA 710053 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| ||||||||||| | || ||||| |||||||| ||||| Sbjct 710054 CCTCCAAGGTGATGGTCTTTCCTGACAGTGTCTTGACAAAGATTTGCAT 710102 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| || | |||| || | || || || ||| |||||||||||||| || | Sbjct 710330 TTCCTCCTCTGAGTCTCAATACTAAATGTATTGTTGACTCTTTCTGAATGTTATAATCTG 710389 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | ||| | | | |||| || | ||| || || || ||||||| || ||||||||| | Sbjct 710390 AAAGGGTTCTCCCATCTTCTAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGCAG 710449 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | || || ||||| | ||||| ||| || |||| | ||| || || | Sbjct 710450 AGATTCCATCTTTGTCTTGGATTTTAGCTTTTACATTCTCTATTGTATCAGAAGCTTCTA 710509 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| ||||||||||| | || ||||| |||||||| ||||| Sbjct 710510 CCTCTAAGGTGATGGTCTTTCCTGACAGTGTCTTGACAAAGATTTGCAT 710558 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||||||||| | |||| |||| || || || |||||||||||||||||| || | Sbjct 710102 TTCCTCCCCTGAGTCTCAATACCACATGTATCGTTGACTCCTTCTGAATGTTATAATCTG 710161 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | | | |||| || | ||| || || || ||||||| || |||| |||| | Sbjct 710162 AAAGAGTTCTCCCATCTTCTAATTGTTTGCCAGCAAAGATCAAACGCTGCTCGTCTGCAG 710221 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGC--TATCGATTCATTGGCCTC 34926 | || || ||||| | ||||| ||| || || | ||| | ||| || || Sbjct 710222 AAATTCCATCTTTGTCTTGGATTTTAGCTTTTAC--ATTCTTTATTGTATCAAAAGCTTC 710279 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | ||| ||||| ||||| | || ||||| |||||||| ||||| Sbjct 710280 TACCTCCAAGGTGATGGTTTTTCCTGACAGTGTCTTGACAAAGATTTGCAT 710330 Score = 86.0 bits (94), Expect = 4e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| || | |||| |||| || | || |||||||||||||||||| || | Sbjct 710558 TTCCTCCTCTGAGTCTCAATACCAAATGGAGTGTTGACTCCTTCTGAATGTTATAATCTG 710617 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | ||| | | |||| || || || || || || ||||||| ||||||||| || | Sbjct 710618 AAAGGGTTCTTCCATCTTCTAGCTGTTTCCCAGCAAAGATCAATCGTTGCTGATCAGGGA 710677 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || || || || | || ||| || || |||| | ||| || || | Sbjct 710678 GAATTCCTTCTTTATCTTGGATCTTTGCCTTCACATTCTCTATTGTATCAGAAGCTTCTA 710737 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | || | ||| || || || || ||||||||||| || || ||||||||| Sbjct 710738 CCTCCAAGGTGATAGTTTTCCCTGTGAGGGTCTTAACGAAAATCTGCATG 710787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324948100461209