Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq5459 86.0 5e-12 seq4862 82.4 6e-11 >seq5459 Length=1306269 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||| |||||||| || | ||||| |||||||||||| | ||| || ||| Sbjct 706330 AATGCAAATCTTTGTCAAGACACTGACAGGAAAAACCATTACCTTGGAAGTAGAAGCTTC 706271 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| | | | || || ||| || ||||| ||||| | ||| ||||| Sbjct 706270 TGATACAATAGAGAATGTGAAGGCAAAAATCCAAGATAAGGAAGGAATTCCCCCTGATCA 706211 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||| | | || | ||| || ||||||||||| || | | ||| || | || || || Sbjct 706210 GCAACGTTTGATCTTTGCTGGGAAACAGCTGGAAGATGGGAGAACTTTGTCAGATTATAA 706151 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGT 107764 ||| || |||||||| || | ||| |||| Sbjct 706150 CATCCAGAAGGAGTCAACTCTCCACTTGGT 706121 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||| ||||||||||| | ||||| || ||||||||| | ||| || ||| Sbjct 705874 AATGCAAATCTTTGTCAAAACACTGACAGGAAAGACCATTACCTTGGAAGTAGAAGCTTC 705815 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | || || |||||| ||||| ||||| | ||| ||||| Sbjct 705814 TGACACAATAGAGAATGTGAAGGCAAAGATCCAAGATAAGGAAGGAATTCCCCCTGATCA 705755 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||| | | || | ||| || ||||||||||| || | | ||| | | || || || Sbjct 705754 GCAACGTTTGATCTTTGCTGGGAAACAGCTGGAAGATGGAAGAACTTTATCAGATTATAA 705695 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGT 107764 ||| || |||||||| || | ||| |||| Sbjct 705694 CATCCAGAAGGAGTCAACTCTTCACTTGGT 705665 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||| ||||||||||| | |||| |||||||| ||| | || || ||| Sbjct 709875 AATGCAAATCTTTGTCAAAACACTGTCAGGAAAAACCATCACCTTGGAGGTAGAAGCTTC 709816 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| | | | |||||| || || || ||||| || | | || || || Sbjct 709815 TGATACAATAGAGAATGTAAAAGCTAAAATCCAAGACAAAGATGGAATCTCTGTAGACCA 709756 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| | | || | ||| || ||||| |||| || | | ||| | |||| || || Sbjct 709755 GCAGCGTTTGATCTTTGCTGGCAAACAATTGGAAGATGGGAGAACTCTTTCGGATTATAA 709696 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 |||||| |||||||| || | || |||| |||||| | |||| |||| Sbjct 709695 CATTCAGAAGGAGTCAACAATACATTTGGTATTGAGACTCAGAGGTGGAA 709646 >seq4862 Length=216935 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||||||||| ||| | || || ||||| || ||| | ||| || || Sbjct 39387 ATGCAAATTTTTGTCAAGACTCTCACTGGAAAAACTATAACCCTGGAAGTTGAAGCATCG 39446 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || ||| || ||| |||||| ||||| | || ||||| Sbjct 39447 GACACAATTGAAAACGTTAAAGCTAAAATTCGCGATAAGGAAGGTATCCCACCTGATCAA 39506 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | |||| ||| || ||||| | || |||| ||| || | ||||| || Sbjct 39507 CAAAGATTAATTTTTGCTGGAAAACAATTAGAAGACGGTCGTACACTGACCGACTATAAT 39566 Query 107736 ATTCAAAAGGAGTCTACGTTGCA 107758 ||||||||||| |||||| |||| Sbjct 39567 ATTCAAAAGGAATCTACGCTGCA 39589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397964764581979