Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq5123 138 1e-27 seq523 89.7 7e-13 seq1073 84.2 3e-11 >seq5123 Length=351926 Score = 138 bits (152), Expect = 1e-27 Identities = 161/215 (75%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 168526 AAGAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTG 168585 ||||| | |||||| |||| | || ||||| || ||||| | |||| ||| | |||| Sbjct 332199 AAGAATTGTTATGGTTTATTAGGGGATCAACAAATGCAAAAGAGTTAAGTGAAAAAGGTA 332258 Query 168586 TTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTACCGAAA 168645 || | ||||| | || || | || |||| |||||||||| | ||||||||| || | Sbjct 332259 TTCACATTTGGGATGAAAACAGCTCACGTGTGTTTTTAGATTCTTCTGGTTTTACAGATA 332318 Query 168646 GAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAAT 168705 | ||||||| |||||||| || ||||||||||||||||||||||| || || ||| Sbjct 332319 GGGAAGAAGGAGATTTAGGGCCTGTTTATGGATTTCAATGGAGACATTTTGGTGCAAAAT 332378 Query 168706 ATATTGACTGTG-ATACAGATTACACCGGACAAGG 168739 |||| || | || || ||||||| | || ||||| Sbjct 332379 ATATAGA-TATGCATGCAGATTATAATGGGCAAGG 332412 >seq523 Length=403916 Score = 89.7 bits (98), Expect = 7e-13 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 193440 CGTATACCTGAAATAGGGGATAAATTTTGTTCAGGAATGGCCCAAAAAGGAACTTGTGGT 193499 ||||| || |||| || ||||||||| |||| | | || ||||| |||||||| Sbjct 70340 CGTATTCCACAAATTGGTGATAAATTTGCTTCACGTCACGGTCAGAAAGGTACTTGTGGA 70281 Query 193500 ATGATTTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATT 193559 || ||| |||||||||||||||||| || | |||| | |||||| ||||| Sbjct 70280 ATTCAATATAGGCAAGAAGATATGCCATTTTCATGTGAAGGTCTTACACCAGACATTATA 70221 Query 193560 ATTAATCCAAATTGTATTCCATCCAGAATGACCATTAATCAAATTATTG 193608 |||||||| || ||||||||| | ||||| ||| ||| | |||| Sbjct 70220 ATTAATCCTCATGCTATTCCATCACGTATGACTATTGGTCACTTGATTG 70172 >seq1073 Length=1777474 Score = 84.2 bits (92), Expect = 3e-11 Identities = 127/178 (71%), Gaps = 2/178 (1%) Strand=Plus/Plus Query 163001 AAGGTTGCTCAATTAAGTGGGTATGTTGCGGAACAAACAGACTATAAACACGGTGAACAA 163060 || ||||| || ||| ||| | ||| || ||||| ||| ||| | || |||||| Sbjct 443447 AAAGTTGCACAGTTAGCTGGTTCTGTAGCCGAACATTCAGCATATCATCATGGTGAAGTT 443506 Query 163061 AAT-TTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATAGC 163119 | |||||| || | || ||||| |||| ||| |||| || || | ||||| ||| Sbjct 443507 TCTCTTATGTCAA-CAATTATTAATCTTGCACAAAATTTCGTAGGAAGCAATAACATAAA 443565 Query 163120 ATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCG 163177 |||||| |||| ||||||||||||||| ||| | |||||| |||||| | ||| Sbjct 443566 TTTACTTCAACCAATTGGTCAATTTGGTACAAGACTTACAGGAGGAAAAGATGCAGCG 443623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633688021191080