Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq5123 114 2e-20 >seq5123 Length=351926 Score = 114 bits (126), Expect = 2e-20 Identities = 183/260 (70%), Gaps = 2/260 (1%) Strand=Plus/Plus Query 180383 CCACTTCTTACAACaaaaaaaaTAGTTTATAAAAATATTCTTAAAGAATTATTATGGATA 180442 ||||| | ||||||||| | || ||| | | || | ||||||| |||||| | Sbjct 332156 CCACTATTAACAACAAAACGAGTATTTTGGAGAGGCGTTGTGGAAGAATTGTTATGGTTT 332215 Query 180443 ATGAAAGGTTTAACAAATTCTAATTTGTTAAATGATATTGGTGTTAAAGTGTGGAATGAT 180502 || | || | ||||||| | || ||||| ||| | ||| || | | ||| |||| Sbjct 332216 ATTAGGGGATCAACAAATGCAAAAGAGTTAAGTGAAAAAGGTATTCACATTTGGGATGAA 332275 Query 180503 AATGGTTCGCGTAAGTTTTTAGATTCTTGTGGATTTCATTTTCGAAAAGAAGGTGATTTA 180562 || | || ||| |||||||||||||| ||| ||| | | ||||||| |||||| Sbjct 332276 AACAGCTCACGTGTGTTTTTAGATTCTTCTGGTTTTACAGATAGGGAAGAAGGAGATTTA 332335 Query 180563 GGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGACTGTG-ATAC 180621 || || ||||||||||||||||||||||| || || ||||||| || | || || | Sbjct 332336 GGGCCTGTTTATGGATTTCAATGGAGACATTTTGGTGCAAAATATATAGA-TATGCATGC 332394 Query 180622 CAACTATATCGGGCAAGGTA 180641 | |||| |||||||||| Sbjct 332395 AGATTATAATGGGCAAGGTA 332414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 653743278299000