Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq5123 134 2e-26 seq1073 93.3 5e-14 >seq5123 Length=351926 Score = 134 bits (148), Expect = 2e-26 Identities = 158/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 171611 AAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTG 171670 ||||| | |||||| |||||| || ||||| || ||||| | |||| ||| | |||| Sbjct 332199 AAGAATTGTTATGGTTTATTAGGGGATCAACAAATGCAAAAGAGTTAAGTGAAAAAGGTA 332258 Query 171671 TTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAA 171730 || | ||||| |||| || | || |||| |||||||||| | || ||||| || | Sbjct 332259 TTCACATTTGGGATGAAAACAGCTCACGTGTGTTTTTAGATTCTTCTGGTTTTACAGATA 332318 Query 171731 GAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAAT 171790 | ||||||| |||||||| || ||||||||||||||||||||||| || || ||| Sbjct 332319 GGGAAGAAGGAGATTTAGGGCCTGTTTATGGATTTCAATGGAGACATTTTGGTGCAAAAT 332378 Query 171791 ATATCGACTGTTATACAGATTACACAGGACAAGG 171824 |||| || || ||||||| | || ||||| Sbjct 332379 ATATAGATATGCATGCAGATTATAATGGGCAAGG 332412 >seq1073 Length=1777474 Score = 93.3 bits (102), Expect = 5e-14 Identities = 129/178 (72%), Gaps = 2/178 (1%) Strand=Plus/Plus Query 165163 AAAGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAACAA 165222 |||||||| || ||| ||| | ||| || ||||| ||| ||| | ||||||||| Sbjct 443447 AAAGTTGCACAGTTAGCTGGTTCTGTAGCCGAACATTCAGCATATCATCATGGTGAAGTT 443506 Query 165223 AAT-TTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATAGC 165281 | |||||| || | || ||||| |||| ||| |||| || || | ||||| ||| Sbjct 443507 TCTCTTATGTCAA-CAATTATTAATCTTGCACAAAATTTCGTAGGAAGCAATAACATAAA 443565 Query 165282 ATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCG 165339 |||||| |||| ||||||||||||||| ||| | |||||| |||||| | ||| Sbjct 443566 TTTACTTCAACCAATTGGTCAATTTGGTACAAGACTTACAGGAGGAAAAGATGCAGCG 443623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627057207912960