Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09]
187,611 sequences; 596,278,454 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq4862 111 2e-19
seq3181 98.7 1e-15
seq5459 96.9 3e-15
seq967 84.2 2e-11
>seq4862
Length=216935
Score = 111 bits (122), Expect = 2e-19
Identities = 151/211 (72%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 137202 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTC 137261
||| | ||| | |||||||||||||| || || ||||| | ||||| ||||||
Sbjct 39140 AACAAGATGGAGAGTAGATTCTTTTTGAATATTATAATCAGAAAGTGTGCGACCGTCTTC 39081
Query 137262 GAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 137321
| |||||| |||||| |||||| | ||| ||||| ||||| || ||||| || ||
Sbjct 39080 CAATTGTTTTCCAGCAAAGATCAATCTTTGTTGATCAGGAGGGATCCCTTCCTTATCTTG 39021
Query 137322 AATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTT 137381
|||||| ||| | | ||| | ||| || | | ||||||||| | || | |||||
Sbjct 39020 AATTTTGGCTTTAACATTTTCAATCGTATCAGATGCTTCTACTTCCAGCGTAATAGTCTT 38961
Query 137382 GCCGGTCAATGTTTTTACGAATATTTGCATA 137412
|| || | ||| || ||||| |||||||||
Sbjct 38960 TCCAGTAAGTGTCTTGACGAAAATTTGCATA 38930
Score = 100 bits (110), Expect = 3e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274
|||||||||||||| || || || || | || | ||||| | |||||| |||
Sbjct 40039 GTAGATTCTTTTTGAATATTATAGTCAGAAAGCGTACGACCATCTTCTAATTGTTTTCCA 39980
Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334
||| ||||||| | ||| ||||| || || || |||||||| || |||||| |||
Sbjct 39979 GCAAAGATCAGTCTTTGTTGATCCGGTGGAATACCTTCTTTATCTTGAATTTTGGCTTTA 39920
Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394
| | ||| | ||| || | || ||||||||| | || | ||||| || || | |||
Sbjct 39919 ACATTTTCAATCGTATCAGAGGCTTCTACTTCCAGCGTAATAGTCTTTCCAGTAAGTGTC 39860
Query 137395 TTTACGAATATTTGCATA 137412
|| ||||| |||||||||
Sbjct 39859 TTGACGAAAATTTGCATA 39842
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274
|||||||||||||| || || ||||| | |||| ||||| | ||||| |||
Sbjct 39811 GTAGATTCTTTTTGAATATTATAATCTGAAAGCGTGCGACCATCTTCTAACTGTTTTCCA 39752
Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334
||| ||||||| | ||| ||||| || || || |||||||| || |||||| |||
Sbjct 39751 GCAAAGATCAGTCTTTGTTGATCCGGTGGAATACCTTCTTTATCTTGAATTTTGGCTTTA 39692
Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394
| | ||| | ||| || | || ||||||||| | || | ||||| || || | ||
Sbjct 39691 ACATTTTCAATCGTATCAGAGGCTTCTACTTCGAGCGTAATAGTCTTTCCAGTAAGGGTC 39632
Query 137395 TTTACGAATATTTGCATA 137412
|| || || |||||||||
Sbjct 39631 TTGACAAAAATTTGCATA 39614
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274
|||||||||||||| || || || ||| | || | | ||||| | ||||||||||
Sbjct 40267 GTAGATTCTTTTTGAATATTATAGTCGGAAAGCGTACGACAATCTTCTAATTGTTTACCA 40208
Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334
||| |||||| | ||||||||| || || || ||||| || || |||||| |||
Sbjct 40207 GCAAAGATCAATCTTTGCTGATCAGGTGGAATACCTTCCTTATCTTGAATTTTGGCTTTA 40148
Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394
| | ||| | || || | || ||||||||| | || | ||||| || || | ||
Sbjct 40147 ACATTTTCAATTGTATCAGAGGCTTCTACTTCTAGCGTAATAGTCTTTCCAGTAAGGGTC 40088
Query 137395 TTTACGAATATTTGCAT 137411
|| || || ||||||||
Sbjct 40087 TTGACAAAAATTTGCAT 40071
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274
|||||||||||||| || || || ||| | || | ||||| | ||||||||||
Sbjct 34568 GTAGATTCTTTTTGAATATTATAGTCGGAAAGCGTACGACCATCTTCTAATTGTTTACCA 34509
Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334
||| |||||| | ||| ||||| || || || ||||| || || |||||| |||
Sbjct 34508 GCAAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCCTTATCTTGAATTTTAGCTTTA 34449
Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394
| | ||| | || |||| | || || || | || | || ||||| |||| ||||
Sbjct 34448 ACGTTTTCAATTGTATCTGATGCCTCAACCTCGAGGGTTATTGTTTTGCCTGTCAGTGTT 34389
Query 137395 TTTACGAATATTTGCAT 137411
|||||||| || |||||
Sbjct 34388 TTTACGAAGATCTGCAT 34372
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274
|||||||||||||| || || ||||| | |||| ||||| || ||||||||
Sbjct 40495 GTAGATTCTTTTTGAATATTATAATCAGAAAGCGTGCGACCATCTTCTAGCTGTTTACCG 40436
Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334
||| | |||| | |||||||| || || || ||||| || || |||||| |||
Sbjct 40435 GCAAATATCAATCTCTGCTGATCTGGTGGAATACCTTCCTTATCTTGAATTTTGGCTTTA 40376
Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394
| | ||| | ||| || | || ||||||||| | || | ||||| || || | ||
Sbjct 40375 ACATTTTCAATCGTATCAGAGGCTTCTACTTCGAGCGTAATAGTCTTTCCAGTAAGGGTC 40316
Query 137395 TTTACGAATATTTGCATA 137412
|| || || |||||||||
Sbjct 40315 TTGACAAAAATTTGCATA 40298
Score = 86.0 bits (94), Expect = 6e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274
|||||||||||||| || || ||||| | |||| ||||| | ||||| |||
Sbjct 38899 GTAGATTCTTTTTGAATATTATAATCTGAAAGCGTGCGACCATCTTCTAACTGTTTTCCA 38840
Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334
||| ||||||| | ||| ||||| || || || ||||| || || |||||| |||
Sbjct 38839 GCAAAGATCAGTCTTTGTTGATCAGGTGGAATACCTTCCTTATCTTGAATTTTGGCTTTA 38780
Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394
| | ||| | ||| || | | ||||||||| | || | ||||| || || | ||
Sbjct 38779 ACATTTTCAATCGTATCAGATGCTTCTACTTCGAGCGTAATAGTCTTTCCAGTAAGGGTC 38720
Query 137395 TTTACGAATATTTGCAT 137411
|| || || ||||||||
Sbjct 38719 TTGACAAAAATTTGCAT 38703
>seq3181
Length=1038259
Score = 98.7 bits (108), Expect = 1e-15
Identities = 138/191 (72%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 137222 CTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAG 137280
||||||| || |||||||| || || | || | ||||| | ||| || |||||| |
Sbjct 489040 CTTTTTGAATATTGTAATCTGACAGGGTACGTCCA-TCTTCTAATTGCTTTCCAGCAAAA 488982
Query 137281 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGT 137340
|| |||||||| ||||| || || ||||||||||| || ||||| ||| | | |
Sbjct 488981 ATGAGACGTTGTTGATCTGGTGGAATGCCTTCTTTATCTTGGATTTTAGCTTTCACATTT 488922
Query 137341 TCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACG 137400
|| | || |||| | ||||||||||| || | || || || ||||| ||||| ||
Sbjct 488921 TCAATAGTATCTGATGATTCTACTTCAAGGGTGATGGTTTTACCCGTCAAAGTTTTCACA 488862
Query 137401 AATATTTGCAT 137411
||||| |||||
Sbjct 488861 AATATCTGCAT 488851
>seq5459
Length=1306269
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 137199 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 137258
||| || ||||| | ||| || || || || ||||| ||||| | || ||| ||
Sbjct 706345 CAATACCAAATGTAGTGTTGACTCCTTCTGGATGTTATAATCTGAAAGGGTTCTCCCATC 706404
Query 137259 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 137318
||| | |||||| |||||| |||||| ||| ||||| || ||||| || |||||||||||
Sbjct 706405 TTCTAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATTCCTTCTTTGTC 706464
Query 137319 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGT 137378
||||| ||||| | ||| | || || | | |||||| || | || | ||
Sbjct 706465 TTGGATTTTCGCTTTTACATTTTCTATTGTATCAGAAGCTTCTACCTCCAAGGTAATGGT 706524
Query 137379 CTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|| || || | ||| || || || ||||||||
Sbjct 706525 TTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 706557
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 137203 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 137262
|| || |||| || || || || || ||||| ||||| | || || |||||
Sbjct 705665 ACCAAGTGAAGAGTTGACTCCTTCTGGATGTTATAATCTGATAAAGTTCTTCCATCTTCC 705724
Query 137263 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 137322
|| ||||| |||||| |||||| |||||||||||| || || || ||||| || ||
Sbjct 705725 AGCTGTTTCCCAGCAAAGATCAAACGTTGCTGATCAGGGGGAATTCCTTCCTTATCTTGG 705784
Query 137323 ATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTG 137382
|| ||| || | | || | ||||| | | ||||||||| | || | |||||
Sbjct 705785 ATCTTTGCCTTCACATTCTCTATTGTGTCAGAAGCTTCTACTTCCAAGGTAATGGTCTTT 705844
Query 137383 CCGGTCAATGTTTTTACGAATATTTGCAT 137411
|| |||| |||||| || || ||||||||
Sbjct 705845 CCTGTCAGTGTTTTGACAAAGATTTGCAT 705873
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 137199 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 137258
||| || || || | || || || ||||| ||||| ||||| | || || ||
Sbjct 721325 CAATACCAAGTGGAGAGTTGACTCCTTTTGGATGTTATAATCTGAAAGGGTTCTTCCATC 721384
Query 137259 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 137318
||| | ||||| ||||| |||||| |||||||||||| || || || |||||||||||
Sbjct 721385 TTCTAACTGTTTGCCAGCGAAGATCAAACGTTGCTGATCAGGTGGGATTCCTTCTTTGTC 721444
Query 137319 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGT 137378
||||| ||||| | ||| | ||||| | | ||| || || | ||| | ||
Sbjct 721445 TTGGATTTTAGCTTTTACATTTTCTATTGTGTCAGAAGCTTCAACCTCTAAAGTGATGGT 721504
Query 137379 CTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|| || || ||||| || || || || |||||
Sbjct 721505 TTTTCCTGTTAATGTCTTAACAAAGATCTGCAT 721537
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 137200 AAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCT 137259
|| || ||||| | || ||||| || || ||||| ||||| | || ||| |||
Sbjct 705434 AATACCAAATGGAGAGTTGATTCCTTCTGAATGTTATAATCTGAAAGAGTCCTCCCATCT 705493
Query 137260 TCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 137319
|| || ||||| |||||| |||||| |||||||||||| || || || ||||| || ||
Sbjct 705494 TCTAGCTGTTTGCCAGCAAAGATCAAACGTTGCTGATCAGGGGGAATTCCTTCCTTATCT 705553
Query 137320 GTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTC 137379
|| || ||| | | || | | ||| | | ||||||||| | || | ||
Sbjct 705554 TGTATCTTAGCTTTCACATTCTCTATTGAGTCAGAAGCTTCTACTTCCAAGGTGATGGTT 705613
Query 137380 TTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|| || |||| ||| || || || ||||||||
Sbjct 705614 TTTCCTGTCAGTGTCTTAACAAAGATTTGCAT 705645
Score = 86.0 bits (94), Expect = 6e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274
|| || || || || ||||| ||||| || || ||| ||||| || ||||| |||
Sbjct 706133 GTTGACTCCTTCTGGATGTTATAATCTGACAAAGTTCTCCCATCTTCCAGCTGTTTCCCA 706192
Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334
||| |||||| |||||||||||| || || || ||||| || || |||||| ||
Sbjct 706193 GCAAAGATCAAACGTTGCTGATCAGGGGGAATTCCTTCCTTATCTTGGATTTTTGCCTTC 706252
Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394
| | || | || || | | ||||||||| | || | || || || |||| |||
Sbjct 706253 ACATTCTCTATTGTATCAGAAGCTTCTACTTCCAAGGTAATGGTTTTTCCTGTCAGTGTC 706312
Query 137395 TTTACGAATATTTGCAT 137411
|| || || ||||||||
Sbjct 706313 TTGACAAAGATTTGCAT 706329
>seq967
Length=1612715
Score = 84.2 bits (92), Expect = 2e-11
Identities = 89/115 (77%), Gaps = 2/115 (2%)
Strand=Plus/Plus
Query 50499 AAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTG 50558
||||| || ||| | || ||| |||| ||||| || || ||||| || || | | || |
Sbjct 653751 AAAGATGCTGTCAAAATTGAACAAGAATTTTTAACAGAAGCTTTGCCTGTTGAAATGATA 653810
Query 50559 GGCATGAAC-GCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTG 50612
||||||||| ||| || | |||||| | || ||||| ||||||||||| ||||||
Sbjct 653811 GGCATGAACTGCAAACTT-ATGTGCCAATATATTGAATTTGTTGCAGATAGATTG 653864
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 487398297145200
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