Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq4862 111 2e-19 seq3181 98.7 1e-15 seq5459 96.9 3e-15 seq967 84.2 2e-11 >seq4862 Length=216935 Score = 111 bits (122), Expect = 2e-19 Identities = 151/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 137202 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTC 137261 ||| | ||| | |||||||||||||| || || ||||| | ||||| |||||| Sbjct 39140 AACAAGATGGAGAGTAGATTCTTTTTGAATATTATAATCAGAAAGTGTGCGACCGTCTTC 39081 Query 137262 GAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 137321 | |||||| |||||| |||||| | ||| ||||| ||||| || ||||| || || Sbjct 39080 CAATTGTTTTCCAGCAAAGATCAATCTTTGTTGATCAGGAGGGATCCCTTCCTTATCTTG 39021 Query 137322 AATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTT 137381 |||||| ||| | | ||| | ||| || | | ||||||||| | || | ||||| Sbjct 39020 AATTTTGGCTTTAACATTTTCAATCGTATCAGATGCTTCTACTTCCAGCGTAATAGTCTT 38961 Query 137382 GCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || || | ||| || ||||| ||||||||| Sbjct 38960 TCCAGTAAGTGTCTTGACGAAAATTTGCATA 38930 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 |||||||||||||| || || || || | || | ||||| | |||||| ||| Sbjct 40039 GTAGATTCTTTTTGAATATTATAGTCAGAAAGCGTACGACCATCTTCTAATTGTTTTCCA 39980 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| ||||||| | ||| ||||| || || || |||||||| || |||||| ||| Sbjct 39979 GCAAAGATCAGTCTTTGTTGATCCGGTGGAATACCTTCTTTATCTTGAATTTTGGCTTTA 39920 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | ||| | ||| || | || ||||||||| | || | ||||| || || | ||| Sbjct 39919 ACATTTTCAATCGTATCAGAGGCTTCTACTTCCAGCGTAATAGTCTTTCCAGTAAGTGTC 39860 Query 137395 TTTACGAATATTTGCATA 137412 || ||||| ||||||||| Sbjct 39859 TTGACGAAAATTTGCATA 39842 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 |||||||||||||| || || ||||| | |||| ||||| | ||||| ||| Sbjct 39811 GTAGATTCTTTTTGAATATTATAATCTGAAAGCGTGCGACCATCTTCTAACTGTTTTCCA 39752 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| ||||||| | ||| ||||| || || || |||||||| || |||||| ||| Sbjct 39751 GCAAAGATCAGTCTTTGTTGATCCGGTGGAATACCTTCTTTATCTTGAATTTTGGCTTTA 39692 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | ||| | ||| || | || ||||||||| | || | ||||| || || | || Sbjct 39691 ACATTTTCAATCGTATCAGAGGCTTCTACTTCGAGCGTAATAGTCTTTCCAGTAAGGGTC 39632 Query 137395 TTTACGAATATTTGCATA 137412 || || || ||||||||| Sbjct 39631 TTGACAAAAATTTGCATA 39614 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 |||||||||||||| || || || ||| | || | | ||||| | |||||||||| Sbjct 40267 GTAGATTCTTTTTGAATATTATAGTCGGAAAGCGTACGACAATCTTCTAATTGTTTACCA 40208 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| |||||| | ||||||||| || || || ||||| || || |||||| ||| Sbjct 40207 GCAAAGATCAATCTTTGCTGATCAGGTGGAATACCTTCCTTATCTTGAATTTTGGCTTTA 40148 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | ||| | || || | || ||||||||| | || | ||||| || || | || Sbjct 40147 ACATTTTCAATTGTATCAGAGGCTTCTACTTCTAGCGTAATAGTCTTTCCAGTAAGGGTC 40088 Query 137395 TTTACGAATATTTGCAT 137411 || || || |||||||| Sbjct 40087 TTGACAAAAATTTGCAT 40071 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 |||||||||||||| || || || ||| | || | ||||| | |||||||||| Sbjct 34568 GTAGATTCTTTTTGAATATTATAGTCGGAAAGCGTACGACCATCTTCTAATTGTTTACCA 34509 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| |||||| | ||| ||||| || || || ||||| || || |||||| ||| Sbjct 34508 GCAAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCCTTATCTTGAATTTTAGCTTTA 34449 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | ||| | || |||| | || || || | || | || ||||| |||| |||| Sbjct 34448 ACGTTTTCAATTGTATCTGATGCCTCAACCTCGAGGGTTATTGTTTTGCCTGTCAGTGTT 34389 Query 137395 TTTACGAATATTTGCAT 137411 |||||||| || ||||| Sbjct 34388 TTTACGAAGATCTGCAT 34372 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 |||||||||||||| || || ||||| | |||| ||||| || |||||||| Sbjct 40495 GTAGATTCTTTTTGAATATTATAATCAGAAAGCGTGCGACCATCTTCTAGCTGTTTACCG 40436 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| | |||| | |||||||| || || || ||||| || || |||||| ||| Sbjct 40435 GCAAATATCAATCTCTGCTGATCTGGTGGAATACCTTCCTTATCTTGAATTTTGGCTTTA 40376 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | ||| | ||| || | || ||||||||| | || | ||||| || || | || Sbjct 40375 ACATTTTCAATCGTATCAGAGGCTTCTACTTCGAGCGTAATAGTCTTTCCAGTAAGGGTC 40316 Query 137395 TTTACGAATATTTGCATA 137412 || || || ||||||||| Sbjct 40315 TTGACAAAAATTTGCATA 40298 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 |||||||||||||| || || ||||| | |||| ||||| | ||||| ||| Sbjct 38899 GTAGATTCTTTTTGAATATTATAATCTGAAAGCGTGCGACCATCTTCTAACTGTTTTCCA 38840 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| ||||||| | ||| ||||| || || || ||||| || || |||||| ||| Sbjct 38839 GCAAAGATCAGTCTTTGTTGATCAGGTGGAATACCTTCCTTATCTTGAATTTTGGCTTTA 38780 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | ||| | ||| || | | ||||||||| | || | ||||| || || | || Sbjct 38779 ACATTTTCAATCGTATCAGATGCTTCTACTTCGAGCGTAATAGTCTTTCCAGTAAGGGTC 38720 Query 137395 TTTACGAATATTTGCAT 137411 || || || |||||||| Sbjct 38719 TTGACAAAAATTTGCAT 38703 >seq3181 Length=1038259 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 137222 CTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAG 137280 ||||||| || |||||||| || || | || | ||||| | ||| || |||||| | Sbjct 489040 CTTTTTGAATATTGTAATCTGACAGGGTACGTCCA-TCTTCTAATTGCTTTCCAGCAAAA 488982 Query 137281 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGT 137340 || |||||||| ||||| || || ||||||||||| || ||||| ||| | | | Sbjct 488981 ATGAGACGTTGTTGATCTGGTGGAATGCCTTCTTTATCTTGGATTTTAGCTTTCACATTT 488922 Query 137341 TCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACG 137400 || | || |||| | ||||||||||| || | || || || ||||| ||||| || Sbjct 488921 TCAATAGTATCTGATGATTCTACTTCAAGGGTGATGGTTTTACCCGTCAAAGTTTTCACA 488862 Query 137401 AATATTTGCAT 137411 ||||| ||||| Sbjct 488861 AATATCTGCAT 488851 >seq5459 Length=1306269 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 137199 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 137258 ||| || ||||| | ||| || || || || ||||| ||||| | || ||| || Sbjct 706345 CAATACCAAATGTAGTGTTGACTCCTTCTGGATGTTATAATCTGAAAGGGTTCTCCCATC 706404 Query 137259 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 137318 ||| | |||||| |||||| |||||| ||| ||||| || ||||| || ||||||||||| Sbjct 706405 TTCTAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATTCCTTCTTTGTC 706464 Query 137319 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGT 137378 ||||| ||||| | ||| | || || | | |||||| || | || | || Sbjct 706465 TTGGATTTTCGCTTTTACATTTTCTATTGTATCAGAAGCTTCTACCTCCAAGGTAATGGT 706524 Query 137379 CTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || || || | ||| || || || |||||||| Sbjct 706525 TTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 706557 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 137203 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 137262 || || |||| || || || || || ||||| ||||| | || || ||||| Sbjct 705665 ACCAAGTGAAGAGTTGACTCCTTCTGGATGTTATAATCTGATAAAGTTCTTCCATCTTCC 705724 Query 137263 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 137322 || ||||| |||||| |||||| |||||||||||| || || || ||||| || || Sbjct 705725 AGCTGTTTCCCAGCAAAGATCAAACGTTGCTGATCAGGGGGAATTCCTTCCTTATCTTGG 705784 Query 137323 ATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTG 137382 || ||| || | | || | ||||| | | ||||||||| | || | ||||| Sbjct 705785 ATCTTTGCCTTCACATTCTCTATTGTGTCAGAAGCTTCTACTTCCAAGGTAATGGTCTTT 705844 Query 137383 CCGGTCAATGTTTTTACGAATATTTGCAT 137411 || |||| |||||| || || |||||||| Sbjct 705845 CCTGTCAGTGTTTTGACAAAGATTTGCAT 705873 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 137199 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 137258 ||| || || || | || || || ||||| ||||| ||||| | || || || Sbjct 721325 CAATACCAAGTGGAGAGTTGACTCCTTTTGGATGTTATAATCTGAAAGGGTTCTTCCATC 721384 Query 137259 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 137318 ||| | ||||| ||||| |||||| |||||||||||| || || || ||||||||||| Sbjct 721385 TTCTAACTGTTTGCCAGCGAAGATCAAACGTTGCTGATCAGGTGGGATTCCTTCTTTGTC 721444 Query 137319 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGT 137378 ||||| ||||| | ||| | ||||| | | ||| || || | ||| | || Sbjct 721445 TTGGATTTTAGCTTTTACATTTTCTATTGTGTCAGAAGCTTCAACCTCTAAAGTGATGGT 721504 Query 137379 CTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || || || ||||| || || || || ||||| Sbjct 721505 TTTTCCTGTTAATGTCTTAACAAAGATCTGCAT 721537 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 137200 AAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCT 137259 || || ||||| | || ||||| || || ||||| ||||| | || ||| ||| Sbjct 705434 AATACCAAATGGAGAGTTGATTCCTTCTGAATGTTATAATCTGAAAGAGTCCTCCCATCT 705493 Query 137260 TCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 137319 || || ||||| |||||| |||||| |||||||||||| || || || ||||| || || Sbjct 705494 TCTAGCTGTTTGCCAGCAAAGATCAAACGTTGCTGATCAGGGGGAATTCCTTCCTTATCT 705553 Query 137320 GTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTC 137379 || || ||| | | || | | ||| | | ||||||||| | || | || Sbjct 705554 TGTATCTTAGCTTTCACATTCTCTATTGAGTCAGAAGCTTCTACTTCCAAGGTGATGGTT 705613 Query 137380 TTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || || |||| ||| || || || |||||||| Sbjct 705614 TTTCCTGTCAGTGTCTTAACAAAGATTTGCAT 705645 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || || || || || ||||| ||||| || || ||| ||||| || ||||| ||| Sbjct 706133 GTTGACTCCTTCTGGATGTTATAATCTGACAAAGTTCTCCCATCTTCCAGCTGTTTCCCA 706192 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| |||||| |||||||||||| || || || ||||| || || |||||| || Sbjct 706193 GCAAAGATCAAACGTTGCTGATCAGGGGGAATTCCTTCCTTATCTTGGATTTTTGCCTTC 706252 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | || || | | ||||||||| | || | || || || |||| ||| Sbjct 706253 ACATTCTCTATTGTATCAGAAGCTTCTACTTCCAAGGTAATGGTTTTTCCTGTCAGTGTC 706312 Query 137395 TTTACGAATATTTGCAT 137411 || || || |||||||| Sbjct 706313 TTGACAAAGATTTGCAT 706329 >seq967 Length=1612715 Score = 84.2 bits (92), Expect = 2e-11 Identities = 89/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 50499 AAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTG 50558 ||||| || ||| | || ||| |||| ||||| || || ||||| || || | | || | Sbjct 653751 AAAGATGCTGTCAAAATTGAACAAGAATTTTTAACAGAAGCTTTGCCTGTTGAAATGATA 653810 Query 50559 GGCATGAAC-GCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTG 50612 ||||||||| ||| || | |||||| | || ||||| ||||||||||| |||||| Sbjct 653811 GGCATGAACTGCAAACTT-ATGTGCCAATATATTGAATTTGTTGCAGATAGATTG 653864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487398297145200