Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09]
187,611 sequences; 596,278,454 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq2432 154 3e-32
seq731 113 1e-19
seq5841 109 1e-18
seq1073 104 6e-17
>seq2432
Length=460960
Score = 154 bits (170), Expect = 3e-32
Identities = 152/194 (78%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 305293 TGATATTGTTATCAGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATC 305352
|||||||||| || ||||||| || ||||| || | |||||||||||||||||
Sbjct 26695 TGATATTGTTGAAAGGCATTTGAGAGATGATGATGTAGTATTATTCAATAGGCAACCATC 26754
Query 305353 ACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTG-ACATTTC 305411
| |||||| | ||| ||||| ||||||| ||||||||| | || | ||||||
Sbjct 26755 TTTACATAAATTAAGTATCATGGCACATAAAGCAAAAGTATTAGAT-CATAGAACATTTA 26813
Query 305412 GATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATA 305471
|||| |||| | ||| |||||| ||||||||||| ||||||||||| ||||||||||||
Sbjct 26814 GATTTAATGAATGTGTTTGTACTCCTTATAATGCTGATTTTGATGGTGATGAAATGAATT 26873
Query 305472 TGCATGTACCTCAA 305485
| ||| ||||||||
Sbjct 26874 TACATTTACCTCAA 26887
>seq731
Length=568950
Score = 113 bits (124), Expect = 1e-19
Identities = 109/140 (78%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 111015 CAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACT 111074
||||||| |||| |||| | ||| || |||| | ||||||||||| ||||||
Sbjct 415543 CAAATTCAAGCTAGAGAATTATGGACAGCTATTCTTGTTGCCCAAGTTGAAACAGGAACT 415484
Query 111075 CCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACA 111134
|||||||| | |||||||||||| ||||| ||||| ||||| | ||||| ||||||
Sbjct 415483 CCTTATATGCTTTATAAAGATCATTGCAATCGTAAATCAAATCATAAAAATTTGGGAACA 415424
Query 111135 ATTAAGTCTAGTAATTTGTG 111154
|| |||| ||||||||||||
Sbjct 415423 ATCAAGTGTAGTAATTTGTG 415404
Score = 86.0 bits (94), Expect = 1e-11
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 112986 AAACATGGAACTACAAACTCTCTACTGTTGGCACCAATGCCTACAGCTTCGACTGCACAG 113045
|||||||| | | ||| ||| |||| | ||||| ||||| ||||| || ||||||||
Sbjct 414719 AAACATGGTATTCGAAATTCTTTACTAATTGCACCTATGCCAACAGCATCTACTGCACAA 414660
Query 113046 ATTCTCGGTAATAATGAATGTTTCGAGCCAATTACAAGTAATATTTATGTCCGACGTGTT 113105
||| | || |||||||| | | | || ||| ||| |||||||||||| || | |||
Sbjct 414659 ATTTTGGGAAATAATGAGTCTATAGAACCATATACCAGTAATATTTATACAAGAAGAGTT 414600
Query 113106 CTAGCAGGTGAGTTT 113120
| |||| ||||||
Sbjct 414599 TTGTCAGGAGAGTTT 414585
>seq5841
Length=940276
Score = 109 bits (120), Expect = 1e-18
Identities = 128/169 (76%), Gaps = 8/169 (5%)
Strand=Plus/Plus
Query 305323 TGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAA 305382
|||| ||| | |||||| | |||||| | ||||| || ||| |||||||| ||| |
Sbjct 721360 TGATCTGGTAATTTTCAATCGTCAACCAACTCTGCACAAGATGAGTATGATGGGTCACAG 721419
Query 305383 AGTCAAAGTATTATC-TGGATTGACATTTCGATTAAATGTAAGTGCTTGTACG---CCTT 305438
||| ||||| ||| | |||| | ||||| || | ||| | ||| ||||| || |
Sbjct 721420 AGTGAAAGTTTTACCATGGAGT-ACATTCCGTATGAATCTTAGT---TGTACATCACCAT 721475
Query 305439 ATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATC 305487
|||| || |||||||| ||||||||||||||| |||||||||| |||||
Sbjct 721476 ATAACGCTGATTTTGACGGAGATGAAATGAATTTGCATGTACCGCAATC 721524
>seq1073
Length=1777474
Score = 104 bits (114), Expect = 6e-17
Identities = 212/304 (70%), Gaps = 16/304 (5%)
Strand=Plus/Plus
Query 279839 AATTATGATGTTCATCGTTCTATTCCTCATTTAATGGATGGTTTGAAACCT--TCACAGC 279896
|||||||| | ||| ||||||||| || | ||||||||||| |||||| ||| ||
Sbjct 443342 AATTATGACAATGTTCGATCTATTCCTAATATGATGGATGGTTTTAAACCTGGTCAAAG- 443400
Query 279897 GTAAG-ATTATATTCAGTTGTTTCAAAAGAAAATTGGTAAA--GGAAATTCGTGTTGCTC 279953
| ||| ||| ||| || || || ||| | || || ||| ||| | ||||| |
Sbjct 443401 GAAAGTATTGTATACA--TGCTTGAAACGTAA--TGACAAACGTGAAGTAAAAGTTGCAC 443456
Query 279954 AGTTAGCAGGTTATGTTTCAGAACATGCAGGTTATCATCACGGTGAAGCGTCTCTTCAAG 280013
||||||| |||| ||| | |||||| ||| |||||||| ||||||| |||||| |
Sbjct 443457 AGTTAGCTGGTTCTGTAGCCGAACATTCAGCATATCATCATGGTGAAGTTTCTCTT--AT 443514
Query 280014 GT--GCTATTGTAGGTCTTGCCCAAGATTTTATGGCTTCAAACAACTTAAATCTGCTTTC 280071
|| | ||| | |||||| ||| |||| | | || ||| ||||| | |||
Sbjct 443515 GTCAACAATTATTAATCTTGCACAAAATTTCGTAGGAAGCAATAACATAAATTTACTTCA 443574
Query 280072 ACCAAATGGTCAATTTGGTTCTCGTATTCACA-ATGGAAAAGATCATGGTAGTGCTCGTT 280130
||||| ||||||||||||| | | | | ||| ||||||||| | ||| |||| |
Sbjct 443575 ACCAATTGGTCAATTTGGTACAAG-ACTTACAGGAGGAAAAGATGCAGCGAGTCCTCGAT 443633
Query 280131 ACAT 280134
||||
Sbjct 443634 ACAT 443637
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1183959979817171
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |