Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq5459 111 1e-19 seq4862 91.5 1e-13 >seq5459 Length=1306269 Score = 111 bits (122), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 33538 AACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCG 33597 || ||||| || ||||| ||| ||||| ||||| ||||| || || || | | | || Sbjct 721326 AATACCAAGTGGAGAGTTGACTCCTTTTGGATGTTATAATCTGAAAGGGTTCTTCCATCT 721385 Query 33598 TCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCG 33657 || || ||||| || || || |||||||| |||||||| | || | ||||||||||| Sbjct 721386 TCTAACTGTTTGCCAGCGAAGATCAAACGTTGCTGATCAGGTGGGATTCCTTCTTTGTCT 721445 Query 33658 GCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGT 33716 ||||| | || |||| || | ||||| | ||| || || | ||||| || Sbjct 721446 TGGATTTT-AGCTTTTACATTTTCTATTGTGTCAGAAGCTTCAACCTCTAAAGTGATGGT 721504 Query 33717 TTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||| |||||||| || || |||||||||||||| Sbjct 721505 TTTTCCTGTTAATGTCTTAACAAAGATCTGCAT 721537 Score = 102 bits (112), Expect = 5e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 33538 AACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCG 33597 || ||||||||||| || ||| || || ||||| ||||| || || || | | || Sbjct 706346 AATACCAAATGTAGTGTTGACTCCTTCTGGATGTTATAATCTGAAAGGGTTCTCCCATCT 706405 Query 33598 TCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCG 33657 || |||||||| || ||||| |||||||||||||| ||| | || | ||||||||||| Sbjct 706406 TCTAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATTCCTTCTTTGTCT 706465 Query 33658 GCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGT 33716 |||||| | || |||| || | || || | ||| || || | || || || Sbjct 706466 TGGATTTTC-GCTTTTACATTTTCTATTGTATCAGAAGCTTCTACCTCCAAGGTAATGGT 706524 Query 33717 TTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||| ||||| | || || |||||||| ||||| Sbjct 706525 TTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 706557 Score = 98.7 bits (108), Expect = 7e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 33538 AACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCG 33597 || ||||||||||| || ||| || || ||||| ||||| || || || | | | || Sbjct 705890 AATACCAAATGTAGTGTTGACTCCTTCTGAATGTTATAATCTGAAAGAGTTCTTCCATCT 705949 Query 33598 TCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCG 33657 || || ||||| || ||||| ||||| |||||||| ||| | || | ||||||||||| Sbjct 705950 TCTAACTGTTTGCCAGCAAAGATCAAGCGCTGCTGGTCTGGAGGGATTCCTTCTTTGTCT 706009 Query 33658 GCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGT 33716 || || || | |||| || | || || | ||| || || | ||||| || Sbjct 706010 TGGATCTT-TGCCTTCACATTCTCTATTGTATCAGAAGCTTCTACCTCCAAGGTGATGGT 706068 Query 33717 TTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||| ||||| | || ||||||||||| ||||| Sbjct 706069 TTTCCCTGTGAGGGTCTTTACAAAGATTTGCAT 706101 Score = 95.1 bits (104), Expect = 8e-15 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 33537 TAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTC 33596 |||||||| || |||||| || || || || |||||||| | ||||| | | | || Sbjct 721097 TAACACCAGGTGGAGAGTGGATTCCTTCTGGATATTGTAATCCAAAAGTGTTCTTCCATC 721156 Query 33597 GTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTC 33656 || | ||||| || ||||| ||||||||||||||||| | || | ||||| || || Sbjct 721157 TTCTAGCTGTTTGCCAGCAAAGATCAAACGCTGCTGATCAGGAGGGATTCCTTCCTTATC 721216 Query 33657 GGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCG 33715 || || |||| |||| || | ||||| | ||| || || | ||||| | Sbjct 721217 TTGTATCTTAGCTTTC-ACATTCTCTATTGTGTCAGAAGCTTCTACTTCCAAGGTGATGG 721275 Query 33716 TTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| | ||||| |||||||| ||||| Sbjct 721276 TTTTCCCTGTCAGTGTTTTCACAAAGATTTGCAT 721309 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||| | | || |||||||||| || ||| || || ||||| ||||| || Sbjct 709648 CCACCTCTGAGTCTCAATACCAAATGTATTGTTGACTCCTTCTGAATGTTATAATCCGAA 709707 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | || ||||||||||| || ||||| |||||||||||||| ||| | Sbjct 709708 AGAGTTCTCCCATCTTCCAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTACAGAG 709767 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || |||||||| ||||| | || |||| || | || || | ||| || Sbjct 709768 ATTCCATCTTTGTCTTGGATTTT-AGCTTTTACATTCTCTATTGTATCAGAAGCTTCTAC 709826 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| ||||| |||| | ||||| |||||||| ||||| Sbjct 709827 CTCCAAGGTGATGGTTTTTCCTGACAGTGTTTTGACAAAGATTTGCAT 709874 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||| | | || ||||| || ||||| ||| || || ||||| ||||| || Sbjct 706559 CCTCCTCTGAGTCTTAGTACCAAGTGGAGAGTTGACTCCTTCTGGATGTTATAATCTGAA 706618 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | | || |||| ||||| || ||||| |||||||| |||||||| | || Sbjct 706619 AGGGTTCTTCCATCTTCCAGCTGTTTCCCAGCAAAGATCAAACGTTGCTGATCAGGGGGA 706678 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| || || || || |||| ||| || | ||||| | ||| || Sbjct 706679 ATTCCTTCCTTATCTTGGATCTTTGCCTTCA-CATTCTCTATTGTGTCAGAAGCTTCTAC 706737 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| ||||| ||||| | || ||||||||||| ||||| Sbjct 706738 CTCCAAAGTGATGGTTTTTCCTGTAAGTGTCTTTACAAAGATTTGCAT 706785 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||| | | || ||||| || ||||| ||| || || ||||| ||||| || Sbjct 706787 CCTCCTCTGAGCCTTAGTACCAAGTGGAGAGTTGACTCCTTCTGGATGTTATAATCTGAA 706846 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | | || |||| ||||| || ||||| |||||||| |||||||| | || Sbjct 706847 AGGGTTCTTCCATCTTCCAGCTGTTTCCCAGCAAAGATCAAACGTTGCTGATCAGGGGGA 706906 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| || || || || |||| ||| || | ||||| | ||| || Sbjct 706907 ATTCCTTCCTTATCTTGGATCTTTGCCTTCA-CATTCTCTATTGTGTCAGAAGCTTCTAC 706965 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| ||||| ||||| | || || || ||||||||||| Sbjct 706966 CTCCAAGGTGATGGTTTTTCCTGTGAGGGTCTTAACGAAGATCTGCAT 707013 >seq4862 Length=216935 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||| | || | || | ||| ||||| |||||||| || || ||||| || Sbjct 39157 CCGCCTCTAAGTCGAAGAACAAGATGGAGAGTAGATTCTTTTTGAATATTATAATCAGAA 39098 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 |||||||| |||| |||||||||||||| ||||| ||||| | || ||||| | || Sbjct 39097 AGTGTGCGACCGTCTTCCAATTGTTTTCCAGCAAAGATCAATCTTTGTTGATCAGGAGGG 39038 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| || || |||||| | || ||||| || | || || || ||| || Sbjct 39037 ATCCCTTCCTTATCTTGAATTTT-GGCTTTAACATTTTCAATCGTATCAGATGCTTCTAC 38979 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||| || || || || || | || || || || || |||||| Sbjct 38978 TTCCAGCGTAATAGTCTTTCCAGTAAGTGTCTTGACGAAAATTTGCATA 38930 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || ||||| || || || |||| ||||| || |||| || ||||||||||| |||||| Sbjct 39577 TCCTTTTGAATATTATAGTCGGTCAGTGTACGACCGTCTTCTAATTGTTTTCCAGCAAAA 39518 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 || || | || ||||| | || | |||||| || ||| |||||| | || ||| | Sbjct 39517 ATTAATCTTTGTTGATCAGGTGGGATACCTTCCTTATCGCGAATTTT-AGCTTTAACGTT 39459 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 || | ||||| || ||| || || | || || ||||| || || | || || || Sbjct 39458 TTCAATTGTGTCCGATGCTTCAACTTCCAGGGTTATAGTTTTTCCAGTGAGAGTCTTGAC 39399 Query 33738 AAAGATCTGCATA 33750 ||| || |||||| Sbjct 39398 AAAAATTTGCATA 39386 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 |||||||| || || || ||||| || || || | || || |||||||| || ||||| Sbjct 34562 TCTTTTTGAATATTATAGTCGGAAAGCGTACGACCATCTTCTAATTGTTTACCAGCAAAG 34503 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 ||||| | || ||||| | || | |||||| || || |||||| ||| ||| | Sbjct 34502 ATCAATCTTTGTTGATCAGGTGGGATACCTTCCTTATCTTGAATTTTAGCTTT-AACGTT 34444 Query 33679 GTCACG-GTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 ||| || || || || || || | || || ||||| ||||| | |||||||| Sbjct 34443 TTCAATTGTATCTGATGCCTCAACCTCGAGGGTTATTGTTTTGCCTGTCAGTGTTTTTAC 34384 Query 33738 AAAGATCTGCAT 33749 ||||||||||| Sbjct 34383 GAAGATCTGCAT 34372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 327952415325120