Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3181 109 5e-19 seq4862 100 3e-16 >seq3181 Length=1038259 Score = 109 bits (120), Expect = 5e-19 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 131934 CTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAGA 131993 |||||||||| ||||| || || |||||| |||||| | || || || | | | | Sbjct 489040 CTTTTTGAATATTGTAATCTGACAGGGTACGTCCATCTTCTAATTGCTTTCCAGCAAAAA 488981 Query 131994 TTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGTT 132053 | ||||| ||||||||||| || |||||||||||||| ||||| ||||| | || Sbjct 488980 TGAGACGTTGTTGATCTGGTGGAATGCCTTCTTTATCTTGGATTTTAGCTTTCACATTTT 488921 Query 132054 CCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATGA 132113 | | |||||| | | || ||||| | || | |||||||| |||| |||||| | | Sbjct 488920 CAATAGTATCTGATGATTCTACTTCAAGGGTGATGGTTTTACCCGTCAAAGTTTTCACAA 488861 Query 132114 AAATCTGCAT 132123 | |||||||| Sbjct 488860 ATATCTGCAT 488851 >seq4862 Length=216935 Score = 100 bits (110), Expect = 3e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||||||||| || |||||| | ||||| |||||| | |||||||| | | Sbjct 34565 GATTCTTTTTGAATATTATAGTCGGAAAGCGTACGACCATCTTCTAATTGTTTACCAGCA 34506 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| | | |||||||| || || || ||||| ||||| |||||| ||| | Sbjct 34505 AAGATCAATCTTTGTTGATCAGGTGGGATACCTTCCTTATCTTGAATTTTAGCTTTAACG 34446 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | ||||| | | ||| || |||| || | ||||| || ||||| |||||| Sbjct 34445 TTTTCAATTGTATCTGATGCCTCAACCTCGAGGGTTATTGTTTTGCCTGTCAGTGTTTTT 34386 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 34385 ACGAAGATCTGCATG 34371 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||||||||| || ||||| | ||||| |||||| | ||||| || | | Sbjct 40036 GATTCTTTTTGAATATTATAGTCAGAAAGCGTACGACCATCTTCTAATTGTTTTCCAGCA 39977 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | |||||||| || || || ||||||||||| |||||| ||| | Sbjct 39976 AAGATCAGTCTTTGTTGATCCGGTGGAATACCTTCTTTATCTTGAATTTTGGCTTTAACA 39917 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | ||||| | | || ||||| | ||| | || || ||||| || || || Sbjct 39916 TTTTCAATCGTATCAGAGGCTTCTACTTCCAGCGTAATAGTCTTTCCAGTAAGTGTCTTG 39857 Query 132110 ATGAAAATCTGCAT 132123 | |||||| ||||| Sbjct 39856 ACGAAAATTTGCAT 39843 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||||||||| || || || | || || |||||| ||||||||||||| | Sbjct 40492 GATTCTTTTTGAATATTATAATCAGAAAGCGTGCGACCATCTTCTAGCTGTTTACCGGCA 40433 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || | | ||| |||||||| || || ||||| ||||| |||||| ||| | Sbjct 40432 AATATCAATCTCTGCTGATCTGGTGGAATACCTTCCTTATCTTGAATTTTGGCTTTAACA 40373 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | ||||| | | || ||||||| ||| | || || ||||| || || || Sbjct 40372 TTTTCAATCGTATCAGAGGCTTCTACTTCGAGCGTAATAGTCTTTCCAGTAAGGGTCTTG 40313 Query 132110 ATGAAAATCTGCAT 132123 | ||||| ||||| Sbjct 40312 ACAAAAATTTGCAT 40299 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| | ||| | | | || ||||||||||| || |||||| | ||||| |||||| Sbjct 40736 AACAAGATGGAGGGTAGATTCTTTTTGAATATTATAGTCGGAAAGCGTACGACCATCTTC 40677 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | ||||| || | | | |||| | |||||||| || || || ||||| ||||| Sbjct 40676 TAATTGTTTCCCAGCAAAAATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTATCTTG 40617 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 |||||| || | | || | ||||||| | || ||||||| || | ||||| Sbjct 40616 AATTTTAGCCTTGACATTCTCGATTGTATCGGAAGCTTCAACTTCGAGAGTAATAGTTTT 40557 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| ||||| || | ||||| ||||| Sbjct 40556 CCCAGTGAGAGTCTTGACAAAAATTTGCAT 40527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475493481201960