Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09]
187,611 sequences; 596,278,454 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq3181 109 5e-19
seq4862 100 3e-16
>seq3181
Length=1038259
Score = 109 bits (120), Expect = 5e-19
Identities = 138/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 131934 CTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAGA 131993
|||||||||| ||||| || || |||||| |||||| | || || || | | | |
Sbjct 489040 CTTTTTGAATATTGTAATCTGACAGGGTACGTCCATCTTCTAATTGCTTTCCAGCAAAAA 488981
Query 131994 TTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGTT 132053
| ||||| ||||||||||| || |||||||||||||| ||||| ||||| | ||
Sbjct 488980 TGAGACGTTGTTGATCTGGTGGAATGCCTTCTTTATCTTGGATTTTAGCTTTCACATTTT 488921
Query 132054 CCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATGA 132113
| | |||||| | | || ||||| | || | |||||||| |||| |||||| | |
Sbjct 488920 CAATAGTATCTGATGATTCTACTTCAAGGGTGATGGTTTTACCCGTCAAAGTTTTCACAA 488861
Query 132114 AAATCTGCAT 132123
| ||||||||
Sbjct 488860 ATATCTGCAT 488851
>seq4862
Length=216935
Score = 100 bits (110), Expect = 3e-16
Identities = 139/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| ||||||||||| || |||||| | ||||| |||||| | |||||||| | |
Sbjct 34565 GATTCTTTTTGAATATTATAGTCGGAAAGCGTACGACCATCTTCTAATTGTTTACCAGCA 34506
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| | | |||||||| || || || ||||| ||||| |||||| ||| |
Sbjct 34505 AAGATCAATCTTTGTTGATCAGGTGGGATACCTTCCTTATCTTGAATTTTAGCTTTAACG 34446
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | ||||| | | ||| || |||| || | ||||| || ||||| ||||||
Sbjct 34445 TTTTCAATTGTATCTGATGCCTCAACCTCGAGGGTTATTGTTTTGCCTGTCAGTGTTTTT 34386
Query 132110 ATGAAAATCTGCATG 132124
| ||| |||||||||
Sbjct 34385 ACGAAGATCTGCATG 34371
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| ||||||||||| || ||||| | ||||| |||||| | ||||| || | |
Sbjct 40036 GATTCTTTTTGAATATTATAGTCAGAAAGCGTACGACCATCTTCTAATTGTTTTCCAGCA 39977
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || | |||||||| || || || ||||||||||| |||||| ||| |
Sbjct 39976 AAGATCAGTCTTTGTTGATCCGGTGGAATACCTTCTTTATCTTGAATTTTGGCTTTAACA 39917
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | ||||| | | || ||||| | ||| | || || ||||| || || ||
Sbjct 39916 TTTTCAATCGTATCAGAGGCTTCTACTTCCAGCGTAATAGTCTTTCCAGTAAGTGTCTTG 39857
Query 132110 ATGAAAATCTGCAT 132123
| |||||| |||||
Sbjct 39856 ACGAAAATTTGCAT 39843
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| ||||||||||| || || || | || || |||||| ||||||||||||| |
Sbjct 40492 GATTCTTTTTGAATATTATAATCAGAAAGCGTGCGACCATCTTCTAGCTGTTTACCGGCA 40433
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
| || | | ||| |||||||| || || ||||| ||||| |||||| ||| |
Sbjct 40432 AATATCAATCTCTGCTGATCTGGTGGAATACCTTCCTTATCTTGAATTTTGGCTTTAACA 40373
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | ||||| | | || ||||||| ||| | || || ||||| || || ||
Sbjct 40372 TTTTCAATCGTATCAGAGGCTTCTACTTCGAGCGTAATAGTCTTTCCAGTAAGGGTCTTG 40313
Query 132110 ATGAAAATCTGCAT 132123
| ||||| |||||
Sbjct 40312 ACAAAAATTTGCAT 40299
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973
||| | ||| | | | || ||||||||||| || |||||| | ||||| ||||||
Sbjct 40736 AACAAGATGGAGGGTAGATTCTTTTTGAATATTATAGTCGGAAAGCGTACGACCATCTTC 40677
Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033
| ||||| || | | | |||| | |||||||| || || || ||||| |||||
Sbjct 40676 TAATTGTTTCCCAGCAAAAATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTATCTTG 40617
Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093
|||||| || | | || | ||||||| | || ||||||| || | |||||
Sbjct 40616 AATTTTAGCCTTGACATTCTCGATTGTATCGGAAGCTTCAACTTCGAGAGTAATAGTTTT 40557
Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||| ||||| || | ||||| |||||
Sbjct 40556 CCCAGTGAGAGTCTTGACAAAAATTTGCAT 40527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475493481201960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |