Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09]
187,611 sequences; 596,278,454 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq5459 104 2e-17
seq3181 100 3e-16
>seq5459
Length=1306269
Score = 104 bits (114), Expect = 2e-17
Identities = 153/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 35522 CTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCG 35581
||||| |||||||||| || |||||| |||||||| ||||| | | |||| |
Sbjct 705887 CTCAATACCAAATGTAGTGTTGACTCCTTCTGAATGTTATAATCTGAAAGAGTTCTTCCA 705946
Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641
|| || | ||| || || ||||| ||||| ||||||||||| | ||| | | || |||
Sbjct 705947 TCTTCTAACTGTTTGCCAGCAAAGATCAAGCGCTGCTGGTCTGGAGGGATTCCTTCTTTG 706006
Query 35642 TCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATC 35701
|| ||||||| ||||| | | | | || || | ||| ||||||| |||||
Sbjct 706007 TCTTGGATCTTTGCCTTCACATTCTCTATTGTATCAGAAGCTTCTACCTCCAAGGTGATG 706066
Query 35702 GTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
||||| || || | || || ||||| || |||||||
Sbjct 706067 GTTTTCCCTGTGAGGGTCTTTACAAAGATTTGCATTC 706103
Score = 93.3 bits (102), Expect = 4e-14
Identities = 153/218 (70%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 35522 CTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCG 35581
||||| |||||||||| || |||||| || ||||| ||||| | | ||||| | |
Sbjct 706343 CTCAATACCAAATGTAGTGTTGACTCCTTCTGGATGTTATAATCTGAAAGGGTTCTCCCA 706402
Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641
|| || | || || || ||||| ||||| ||||||||||| | ||||| | || |||
Sbjct 706403 TCTTCTAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATTCCTTCTTTG 706462
Query 35642 TCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGAT 35700
|| ||| ||| || || | | || | | || || | ||| ||||||| || ||
Sbjct 706463 TCTTGGAT-TTTCGCTTTTACATTTTCTATTGTATCAGAAGCTTCTACCTCCAAGGTAAT 706521
Query 35701 CGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
||||| || || | || || ||||| || |||||||
Sbjct 706522 GGTTTTTCCTGTGAGTGTCTTGACAAAGATTTGCATTC 706559
>seq3181
Length=1038259
Score = 100 bits (110), Expect = 3e-16
Identities = 137/189 (72%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 35549 TTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATC 35608
|||||||| |||||||| | || ||| || | || || | ||||| || ||||| ||
Sbjct 489038 TTTTGAATATTGTAATCTGACAGGGTACGTCCATCTTCTAATTGCTTTCCAGCAAAAATG 488979
Query 35609 AACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTT-CAGAGTTGC 35667
| || || || || | |||| || || || || ||| ||| |||| || | || |
Sbjct 488978 AGACGTTGTTGATCTGGTGGAATGCCTTCTTTATCTTGGAT-TTTAGCTTTCACATTTTC 488920
Query 35668 CACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727
| || || ||||| || || | ||||| ||||||||||||||||||||||||||
Sbjct 488919 AATAGTATCTGATGATTCTACTTCAAGGGTGATGGTTTTACCCGTCAAAGTTTTCACAAA 488860
Query 35728 TATCTGCAT 35736
|||||||||
Sbjct 488859 TATCTGCAT 488851
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449736427023880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |