Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq5459 104 2e-17 seq3181 100 3e-16 >seq5459 Length=1306269 Score = 104 bits (114), Expect = 2e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 35522 CTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCG 35581 ||||| |||||||||| || |||||| |||||||| ||||| | | |||| | Sbjct 705887 CTCAATACCAAATGTAGTGTTGACTCCTTCTGAATGTTATAATCTGAAAGAGTTCTTCCA 705946 Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641 || || | ||| || || ||||| ||||| ||||||||||| | ||| | | || ||| Sbjct 705947 TCTTCTAACTGTTTGCCAGCAAAGATCAAGCGCTGCTGGTCTGGAGGGATTCCTTCTTTG 706006 Query 35642 TCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATC 35701 || ||||||| ||||| | | | | || || | ||| ||||||| ||||| Sbjct 706007 TCTTGGATCTTTGCCTTCACATTCTCTATTGTATCAGAAGCTTCTACCTCCAAGGTGATG 706066 Query 35702 GTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 ||||| || || | || || ||||| || ||||||| Sbjct 706067 GTTTTCCCTGTGAGGGTCTTTACAAAGATTTGCATTC 706103 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 35522 CTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCG 35581 ||||| |||||||||| || |||||| || ||||| ||||| | | ||||| | | Sbjct 706343 CTCAATACCAAATGTAGTGTTGACTCCTTCTGGATGTTATAATCTGAAAGGGTTCTCCCA 706402 Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641 || || | || || || ||||| ||||| ||||||||||| | ||||| | || ||| Sbjct 706403 TCTTCTAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATTCCTTCTTTG 706462 Query 35642 TCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGAT 35700 || ||| ||| || || | | || | | || || | ||| ||||||| || || Sbjct 706463 TCTTGGAT-TTTCGCTTTTACATTTTCTATTGTATCAGAAGCTTCTACCTCCAAGGTAAT 706521 Query 35701 CGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 ||||| || || | || || ||||| || ||||||| Sbjct 706522 GGTTTTTCCTGTGAGTGTCTTGACAAAGATTTGCATTC 706559 >seq3181 Length=1038259 Score = 100 bits (110), Expect = 3e-16 Identities = 137/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 35549 TTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATC 35608 |||||||| |||||||| | || ||| || | || || | ||||| || ||||| || Sbjct 489038 TTTTGAATATTGTAATCTGACAGGGTACGTCCATCTTCTAATTGCTTTCCAGCAAAAATG 488979 Query 35609 AACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTT-CAGAGTTGC 35667 | || || || || | |||| || || || || ||| ||| |||| || | || | Sbjct 488978 AGACGTTGTTGATCTGGTGGAATGCCTTCTTTATCTTGGAT-TTTAGCTTTCACATTTTC 488920 Query 35668 CACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727 | || || ||||| || || | ||||| |||||||||||||||||||||||||| Sbjct 488919 AATAGTATCTGATGATTCTACTTCAAGGGTGATGGTTTTACCCGTCAAAGTTTTCACAAA 488860 Query 35728 TATCTGCAT 35736 ||||||||| Sbjct 488859 TATCTGCAT 488851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449736427023880