Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq5123 116 3e-21 >seq5123 Length=351926 Score = 116 bits (128), Expect = 3e-21 Identities = 182/258 (71%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 112030 CCTTTACCAGTATAATCCGCCTG-ACATCCAGTGTATGTTGCCCCATAGTGTCTCCATTG 112088 |||| ||| ||||||| || || | ||| | | ||| |||| ||| | ||||||||||| Sbjct 332412 CCTTGCCCATTATAATCTGCATGCATATCTA-TATATTTTGCACCAAAATGTCTCCATTG 332354 Query 112089 GAATCCATAAATAGGCCCCAGATCTCCCGGGGCTGTATCTGGAAATTGCTCTCTATTCAA 112148 |||||||||| |||||| | |||||| | |||||| ||| || || Sbjct 332353 AAATCCATAAACAGGCCCTAAATCTCCTTCTTCCCTATCTGTAAAACCAGAAGAATCTAA 332294 Query 112149 CAAATCACTTCTAATATGAGGATTCCAAATCTTCACTCCTTTAGATGATAACTCTCTTGC 112208 || ||| | | | || |||||| | | ||||| ||||||| |||| Sbjct 332293 AAACACACGTGAGCTGTTTTCATCCCAAATGTGAATACCTTTTTCACTTAACTCTTTTGC 332234 Query 112209 ATTTGTGGATCCTCTAATAAACCATAGCAATTCTTCCACAACCCCTTTCCAGTACACTCT 112268 |||||| ||||| ||||||||||||| ||||||||||||||| ||| |||| | |||| Sbjct 332233 ATTTGTTGATCCCCTAATAAACCATAACAATTCTTCCACAACGCCTCTCCAAAATACTCG 332174 Query 112269 TTTAGTAGTTAGCAGTGG 112286 ||| || |||| ||||| Sbjct 332173 TTTTGTTGTTAATAGTGG 332156 Score = 95.1 bits (104), Expect = 9e-15 Identities = 116/156 (74%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 111781 GTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCT 111840 || || ||||| | ||||| || ||||||| ||| ||||| |||||||| || || Sbjct 332744 GTAATATGTGCCAGCATGTGAGTTAGTAGACAATAAGATGCAATATTAAATGGTACTCCA 332685 Query 111841 AGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATAA 111900 || ||||||||| | ||||||||| || |||||||||| | || | ||||||| Sbjct 332684 AGACCCATATCTGCACTTCTTTGATAAAGTTGACATGATAACTCTTTATCATTCACATAA 332625 Query 111901 AATTGACAAAGTACA-TGACAAGGAGGCAATGCCAT 111935 |||||| ||| ||| ||||| ||||| | ||||| Sbjct 332624 AATTGAACAAG-ACAGTGACAGGGAGGTAGGGCCAT 332590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391049412833593