Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq5459 100 2e-16 >seq5459 Length=1306269 Score = 100 bits (110), Expect = 2e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 39072 TAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTC 39131 |||||| ||||| || || ||| ||||| || ||||| || | ||| |||| | || Sbjct 709434 TAACACTAAATGGAGTGTTGACTCCTTTTGAATGTTATAGTCTGAAAGAGTTCTACCATC 709493 Query 39132 ATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGT 39190 || | |||||| || ||||| || | ||||||| |||| |||||| || ||||||| Sbjct 709494 TTCTAACTGTTTTCCAGCAAAGATCAAACGCTGCAGGTCAGGTGGGATTTCT-TCTTTGT 709552 Query 39191 CCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATAC 39250 || |||||| ||| | || | | ||||| | || || |||| |||| Sbjct 709553 CCTGGATTTTAGCTTTTAAATTCTCTATAGTATCAGAAGCATCTACCTCCAAAATGATGG 709612 Query 39251 TTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||||| ||||| || || |||||||||||||| Sbjct 709613 TTTTTCCAGTCAGTGTCTTTACAAAGATTTGCAT 709646 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 39073 AACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCA 39132 || ||||||||||| || ||| || || || |||||||| | ||| |||| | || Sbjct 706346 AATACCAAATGTAGTGTTGACTCCTTCTGGATGTTATAATCTGAAAGGGTTCTCCCATCT 706405 Query 39133 TCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCC 39192 || | |||||||| ||||| || | |||||||||||| | || | | |||||||| Sbjct 706406 TCTAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATTCCTTCTTTGTCT 706465 Query 39193 ATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTT 39252 ||||||| ||| | | | | ||||| | || || |||| || || || Sbjct 706466 TGGATTTTCGCTTTTACATTTTCTATTGTATCAGAAGCTTCTACCTCCAAGGTAATGGTT 706525 Query 39253 TTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || || || |||||||||||||| Sbjct 706526 TTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 706557 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 39073 AACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCA 39132 || ||||||||||| || ||| || || || |||||||| | ||| |||| | | || Sbjct 705890 AATACCAAATGTAGTGTTGACTCCTTCTGAATGTTATAATCTGAAAGAGTTCTTCCATCT 705949 Query 39133 TCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCC 39192 || | ||||||||| ||||| || | ||||||||||| | || | | |||||||| Sbjct 705950 TCTAACTGTTTGCCAGCAAAGATCAAGCGCTGCTGGTCTGGAGGGATTCCTTCTTTGTCT 706009 Query 39193 ATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTT 39252 ||| || || | || | | ||||| | || || |||| ||||| || Sbjct 706010 TGGATCTTTGCCTTCACATTCTCTATTGTATCAGAAGCTTCTACCTCCAAGGTGATGGTT 706069 Query 39253 TTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || || |||||||||||||| Sbjct 706070 TTCCCTGTGAGGGTCTTTACAAAGATTTGCAT 706101 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 39073 AACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCA 39132 || |||||||||| || ||| || || || |||||||| | ||| |||| | || Sbjct 709663 AATACCAAATGTATTGTTGACTCCTTCTGAATGTTATAATCCGAAAGAGTTCTCCCATCT 709722 Query 39133 TCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCC 39192 || | |||||||| ||||| || | |||||||||||| | | | |||||||| Sbjct 709723 TCCAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTACAGAGATTCCATCTTTGTCT 709782 Query 39193 ATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTT 39252 |||||| ||| | || | | ||||| | || || |||| ||||| || Sbjct 709783 TGGATTTTAGCTTTTACATTCTCTATTGTATCAGAAGCTTCTACCTCCAAGGTGATGGTT 709842 Query 39253 TTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| | ||| ||||| |||||||||||||| Sbjct 709843 TTTCCTGACAGTGTTTTGACAAAGATTTGCAT 709874 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 |||||||| | | || || ||||||| || ||| || || || ||| |||| | | Sbjct 709876 CCTCCTCTGAGTCTCAATACTAAATGTATTGTTGACTCCTTCTGAATGTTAGAATCTGAA 709935 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || |||| | || || | |||||||| ||||| || | |||||||||||| | | Sbjct 709936 AGAGTTCTCCCATCTTCTAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGCAGAG 709995 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | | ||||||||| |||||| ||| | || | | ||||| | || || Sbjct 709996 ATTCCCTCTTTGTCTTGGATTTTAGCTTTTACATTCTCTATTGTATCAGAAGCTTCTACC 710055 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| ||||| | ||||| | ||| || || |||||||||||||| Sbjct 710056 TCCAAGGTGATGGTCTTTCCTGACAGTGTCTTGACAAAGATTTGCAT 710102 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 |||||||| | | || || ||||||| || |||||| || || |||||||| | | Sbjct 710332 CCTCCTCTGAGTCTCAATACTAAATGTATTGTTGACTCTTTCTGAATGTTATAATCTGAA 710391 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || |||| | || || | |||||||| ||||| || | |||||||||||| | | Sbjct 710392 AGGGTTCTCCCATCTTCTAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGCAGAG 710451 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | | |||||||| |||||| ||| | || | | ||||| | || || Sbjct 710452 ATTCCATCTTTGTCTTGGATTTTAGCTTTTACATTCTCTATTGTATCAGAAGCTTCTACC 710511 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | ||||| | ||||| | ||| || || |||||||||||||| Sbjct 710512 TCTAAGGTGATGGTCTTTCCTGACAGTGTCTTGACAAAGATTTGCAT 710558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428563440092843