Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq731 235 8e-57 seq967 152 7e-32 >seq731 Length=568950 Score = 235 bits (260), Expect = 8e-57 Identities = 237/308 (77%), Gaps = 0/308 (0%) Strand=Plus/Plus Query 77031 TGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTC 77090 || || |||||| || || ||||||| |||||| ||||| |||||||| | || || Sbjct 414487 TGGATAGAACCATTATTTGCTATAATTTCATTCTTCATATCCTCATTCCAAAGATTTCTT 414546 Query 77091 TCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTA 77150 || |||||| ||| | | ||||||||| || |||||||| ||||| ||||| ||||| Sbjct 414547 TCAGTTAAATCTCGCAACAAATGAGGATTTACGATTTGAAACTCTCCTGACAAAACTCTT 414606 Query 77151 CGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCA 77210 | || ||||||||||||||||||||||| | ||| ||||| |||||||||||||| ||| Sbjct 414607 CTTGTATAAATATTACTGGTATATGGTTCTATAGACTCATTATTTCCCAAAATTTGTGCA 414666 Query 77211 GTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATT 77270 ||||| || |||||||||||||| | | |||| ||||| | ||||||| | ||| Sbjct 414667 GTAGATGCTGTTGGCATAGGTGCAATTAGTAAAGAATTTCGAATACCATGTTTAGCAATT 414726 Query 77271 TTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTAT 77330 || |||||| |||||||||||| | ||||| || ||||| ||| | || ||| Sbjct 414727 TTTGCTTTTAATGTTTTCCAATCCCATAAATCTGTTGGAGTAACATTCCACATGTCATAT 414786 Query 77331 TGTAGAAT 77338 |||| ||| Sbjct 414787 TGTAAAAT 414794 Score = 141 bits (156), Expect = 1e-28 Identities = 223/316 (71%), Gaps = 10/316 (3%) Strand=Plus/Plus Query 78069 TTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 78128 || |||||||| ||||||||||| | ||| || | |||||| | |||||||||||||| | Sbjct 415895 TTACCTGTATTTTTTTTAAGATCTAAAAATTCAAAAATATCTGCATGCCATGGTTCTACA 415954 Query 78129 TATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTA 78188 ||||| || | |||| |||| |||||| || || ||||| | ||||| || || ||| Sbjct 415955 TATATAGCAAATGCTCCTGGTCTTTTATTTCCACCTTGATCAACATATCGCGCTGTATTA 416014 Query 78189 TTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAA 78248 ||||| ||||| | ||| ||||| | ||| |||||| ||| ||| |||| || Sbjct 416015 TTATATACTCTGATCATAGGAATCAAACCATTAGATACACCAAGTGTACCAGCTATTGGT 416074 Query 78249 CTTCCACTTGCGCGAATATTACTAATGGATAT----CCCTATTCCTCCTGCCATCTTAGA 78304 | || ||||| |||||| |||| | || || || || || ||| ||| Sbjct 416075 GTACCTCTTGCTCGAATA----CAATGTACATTAAGTCCAATACCACCAGCCGATTTACT 416130 Query 78305 TATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCA-TGT 78363 || || || || ||| ||||||| || || || || || || ||||| || ||| Sbjct 416131 AATAAGTGCACACTTTTTTAATGTATTATATATTCCTTCAATGCTATCATCTTCCATTGT 416190 Query 78364 TAAGAAGAAAACAGCT 78379 ||| || |||||| || Sbjct 416191 TAATAA-AAAACAACT 416205 Score = 129 bits (142), Expect = 8e-25 Identities = 246/359 (69%), Gaps = 10/359 (3%) Strand=Plus/Plus Query 77524 TACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAA 77583 |||| |||||||||||| | ||| || | ||| || |||| ||| ||||||||||| | Sbjct 415180 TACCCATAGGTCTATGTTTAAAATTTGATACTTTTGCCTCTGAAATCGGATAATAATTGA 415239 Query 77584 TGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAA 77643 ||| |||| ||| | | ||| | ||| | ||| ||| || || || ||| Sbjct 415240 CGTCGATAACTTTGTCTAAATTACGCGTAACAATTTTTGTCACTTCTCGAAGCTTTTGAA 415299 Query 77644 AATCAAATCTTCCATCTA-------TAACAAACATGTTCAAAGCTATAGATGCTAGATTA 77696 ||||| || | | || || | |||||||| || | ||| || || |||| ||| Sbjct 415300 AATCATATGTCCTAT-TATCAGAATTTACAAACATATTTACAGCAATTGAGGCTAAATTG 415358 Query 77697 CAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACAT 77756 || ||||| | ||||| | | | ||| | || || || ||||| | ||||||||| Sbjct 415359 CACACTGCAATTTCATTTGGACTAGAATACTCTACAATTTCAGTACACAAATTACTACAC 415418 Query 77757 TTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGC-ATGAGTCCTTATAAAGAAT 77815 ||||| || |||| ||||| || || || ||||| |||| || |||||||| || Sbjct 415419 TTGATTGTTCCCAAATTTTTATGATTTGATTTACGATTGCAATGA-TCTTTATAAAGCAT 415477 Query 77816 AAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTT 77874 | | ||||| || ||||||| || | | | ||||| | |||| | ||||||||| Sbjct 415478 ATAAGGAGTTCCTGTTTCAACTTGGGCAACAAGAATAGCTGTCCATAATTCTCTAGCTT 415536 Score = 129 bits (142), Expect = 8e-25 Identities = 197/279 (71%), Gaps = 10/279 (4%) Strand=Plus/Plus Query 78368 AAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGC 78427 ||||| || ||||||||||| || || | ||| | |||| ||| | ||| |||||||| Sbjct 416261 AAGAATAC--CTAGACATTTGTTGTTGTATAGTACATGCAGAAAAAAGTGTTGGAGATGC 416318 Query 78428 ATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC--- 78484 ||| ||||| | ||| || | | ||| || ||||| ||| || ||||||||| Sbjct 416319 ATGTGTAAAATAACGTTCTGATAAAAAATTATAAGTTTCTATAACTCTTTCTATGTCTTC 416378 Query 78485 -CCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCT 78543 |||| |||| | || || || | ||| |||||||| || ||||||||||| | Sbjct 416379 ACCATGGATG----GCAACTGCAACTCTCATTAACATATGTTGTGGTCTTTCAACAACTT 416434 Query 78544 TATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATG 78603 | || |||||| | ||||| |||| | ||||| |||||||||||||| || Sbjct 416435 TCCCATGTATTTTTAGTAAGTAACTCCTTTCAAGCGTTTTGAAACCAAAATAGTTATAGC 416494 Query 78604 AAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTAT 78642 |||||||| || ||||| || |||| |||| |||| Sbjct 416495 TGAAGTCTCTATCATAAATTATTGCAGAGTTTAACTTAT 416533 Score = 123 bits (136), Expect = 3e-23 Identities = 128/167 (77%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 77914 TATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGC 77973 |||| ||| |||||||||||| ||||||||||||| | ||||| |||| | ||| | Sbjct 415640 TATAAAGC--TTCAAATTCATCGCCCCAAACATCATGTAGACCAGGAGATTCGTGTGGAC 415697 Query 77974 ACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATA 78033 |||| || ||| | ||| | | ||||||||||||||| |||||||||||||||| Sbjct 415698 ACATTAAACTCCATTTTTCATTATTCAAAACTCGTTTCATAAAAAGATCAGGTATCCATA 415757 Query 78034 GAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTC 78080 |||| ||||| |||| | ||||| |||||| || |||||| || Sbjct 415758 AAGCATAAAATAATTCTCTTGCTCTATTTTCTTCCTTACCTGTAGTC 415804 Score = 93.3 bits (102), Expect = 6e-14 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 77357 TCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGC 77416 ||| ||||| |||||||| | |||| ||||| || ||||| || ||||| || || Sbjct 414934 TCCTTTATAGGTTTCATATGTACCTTTCTCCTCAGCAAGCTCACAGCTAGCTTCTAAAGC 414993 Query 77417 TCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAA 77476 | |||||| | ||||| || |||| |||| || | ||||| || ||| ||||| Sbjct 414994 ACTGTAATATAACGTTTCAAATATCTGGATATTAAGCTTCTGTGCCTCTTCACTTTCAAA 415053 Query 77477 CGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACC 77527 ||||| | | | || ||| |||||||| | || |||||||||||||| Sbjct 415054 TGGATATCGCATTAAAAGAAATGCATCTGCAAGACCTTGAACTCCAATACC 415104 >seq967 Length=1612715 Score = 152 bits (168), Expect = 7e-32 Identities = 176/236 (75%), Gaps = 1/236 (0%) Strand=Plus/Minus Query 48390 TTTTCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATA 48449 ||||| | || |||| ||| || || || || || | | ||||||||| || || | | Sbjct 653259 TTTTCTTAGC-ATCTGTAATATATGTGTCAATCAATAAAGAATACATTTCTGAATGTACA 653201 Query 48450 TTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTA 48509 ||||| || || | ||||| || |||||||| | || ||||| | |||||| || | Sbjct 653200 TTTTCCATGGCAACTTGAAAGCCATAAAAACAACGTGCCTCTGTTACCTGTACTTCTTGA 653141 Query 48510 CAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAAT 48569 | |||||||||| | | ||| ||||| |||||||||||| ||||||||||||||||||| Sbjct 653140 CTAAATCGTTCAACAAGATTTTCATTAACTATTCCATCAGAAGCAGCAAAAAATGCTAAT 653081 Query 48570 ACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATC 48625 ||||| ||||||| ||| || ||| ||| | |||||||||| ||||| Sbjct 653080 ACATGAGATATAAAATGTTTCTCATTGTCAGTTAAACGATTCCAGTCAAATATATC 653025 Score = 109 bits (120), Expect = 8e-19 Identities = 156/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 47938 TATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATC 47997 || ||| |||| | | ||||||||| || || |||||||||||| ||||| |||||| Sbjct 653895 TACAAACCTTTTGACAGCCTAATTCTATAAGCAATCTATCTGCAACAAATTCAATATATT 653836 Query 47998 TTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACT 48057 ||| | || || ||||| ||||| | || ||| || | ||| || || | ||| | Sbjct 653835 GGCACATAAGTTTGCAGTTCATGCCTATCATTTCAACAGGCAAAGCTTCTGTTAAAAATT 653776 Query 48058 CTTGTTCGATAGTGACAGCATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGAT 48117 ||||||| || |||||||||| || || ||||| || ||| | |||| | Sbjct 653775 CTTGTTCAATTTTGACAGCATCTTTAATAATTGATGTGACTCGATCCGGAGGTGGTTTTT 653716 Query 48118 ACAACAAATGTTTAAACATTAAACATGCAAAATCACAATG 48157 | | ||||| |||||||||||||| ||||| ||||| Sbjct 653715 GTATAATGTGTTTGAACATTAAACATGCGAAATCGCAATG 653676 Score = 100 bits (110), Expect = 4e-16 Identities = 82/100 (82%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 48636 TCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCA 48695 || |||||||| |||||||||| |||||||| |||||||||||||||||||| || ||| Sbjct 652940 TCCACTTCTTCCACTGTCCAAAAAGATGCCTCAGCTTTTTTATACATATTCCAAATGTCA 652881 Query 48696 CTGTATTGGATTGGGAAAATAACAAATCTATTTGGATTTT 48735 |||| || || |||| |||||| ||| |||||||| Sbjct 652880 GGCCATTGAATAGGAAAAACAACAAACCTACGTGGATTTT 652841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693039706147040