Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq731 226 4e-54 seq967 161 1e-34 >seq731 Length=568950 Score = 226 bits (250), Expect = 4e-54 Identities = 223/288 (77%), Gaps = 0/288 (0%) Strand=Plus/Plus Query 75646 TATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAG 75705 ||||||| |||||| || || |||||||| | ||||| || |||||| ||| | | Sbjct 414507 TATAATTTCATTCTTCATATCCTCATTCCAAAGATTTCTTTCAGTTAAATCTCGCAACAA 414566 Query 75706 ATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGT 75765 ||||||||| || |||||||| ||||| ||||| ||||||| || |||||||||||||| Sbjct 414567 ATGAGGATTTACGATTTGAAACTCTCCTGACAAAACTCTTCTTGTATAAATATTACTGGT 414626 Query 75766 ATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGG 75825 ||||||||| | ||| ||||| |||||||||||||| ||||| || || || |||||||| Sbjct 414627 ATATGGTTCTATAGACTCATTATTTCCCAAAATTTGTGCAGTAGATGCTGTTGGCATAGG 414686 Query 75826 TGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCA 75885 ||| | | |||| ||||| | ||||||| | ||||| |||||| |||||| Sbjct 414687 TGCAATTAGTAAAGAATTTCGAATACCATGTTTAGCAATTTTTGCTTTTAATGTTTTCCA 414746 Query 75886 ATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAAT 75933 |||||| | ||||| ||| ||||| ||| | || ||||||| ||| Sbjct 414747 ATCCCATAAATCTGTTGGAGTAACATTCCACATGTCATATTGTAAAAT 414794 Score = 150 bits (166), Expect = 3e-31 Identities = 222/312 (71%), Gaps = 2/312 (1%) Strand=Plus/Plus Query 76664 TTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGA 76723 || |||||||| ||||||||||||| || || | |||||| | |||||||||||||| | Sbjct 415895 TTACCTGTATTTTTTTTAAGATCTAAAAATTCAAAAATATCTGCATGCCATGGTTCTACA 415954 Query 76724 TATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTA 76783 ||||| || | | || |||| |||||| || || ||||| | ||||| || || ||| Sbjct 415955 TATATAGCAAATGCTCCTGGTCTTTTATTTCCACCTTGATCAACATATCGCGCTGTATTA 416014 Query 76784 TTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAA 76843 ||||| ||||| | ||| ||||| | || |||||| |||| ||| |||| || Sbjct 416015 TTATATACTCTGATCATAGGAATCAAACCATTAGATACACCAAGTGTACCAGCTATTGGT 416074 Query 76844 CTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATT 76903 | || | ||| |||||| | | | || || || || || ||| |||| || Sbjct 416075 GTACCTCTTGCTCGAATACAATGTACATTAAGTCCAATACCACCAGCCGATTTACTAATA 416134 Query 76904 AGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCA-TGTTAAG 76962 || ||||| ||| ||||| | ||| || || || || |||||||| || |||||| Sbjct 416135 AGTGCACACTTTTTTAATGTATTATATATTCCTTCAATGCTATCATCTTCCATTGTTAAT 416194 Query 76963 AAGAAAACAGCT 76974 || |||||| || Sbjct 416195 AA-AAAACAACT 416205 Score = 125 bits (138), Expect = 1e-23 Identities = 128/167 (77%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 76509 TATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGAC 76568 ||||||| |||||||||||| ||||||||||||| | ||||||| |||| | |||| Sbjct 415638 TATATAAAGCTTCAAATTCATCGCCCCAAACATCATGTAGACCAGGAGATTCGTGTGGAC 415697 Query 76569 ACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATA 76628 |||| || ||| | ||| | | ||| ||||||||||| |||||||||||||||| Sbjct 415698 ACATTAAACTCCATTTTTCATTATTCAAAACTCGTTTCATAAAAAGATCAGGTATCCATA 415757 Query 76629 GAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTC 76675 |||| ||||| |||| | |||| |||||| || |||||| || Sbjct 415758 AAGCATAAAATAATTCTCTTGCTCTATTTTCTTCCTTACCTGTAGTC 415804 Score = 120 bits (132), Expect = 4e-22 Identities = 265/394 (67%), Gaps = 10/394 (3%) Strand=Plus/Plus Query 76119 TACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAA 76178 |||| |||||||||||| | ||| || | || || |||| ||| || |||||||| | Sbjct 415180 TACCCATAGGTCTATGTTTAAAATTTGATACTTTTGCCTCTGAAATCGGATAATAATTGA 415239 Query 76179 TATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAA 76238 || |||| ||| | | ||| | ||| | ||| ||| || || || ||| Sbjct 415240 CGTCGATAACTTTGTCTAAATTACGCGTAACAATTTTTGTCACTTCTCGAAGCTTTTGAA 415299 Query 76239 AATCAAATTTTCCATCTATCA-------CAAACATATTAAGAGCTATAGATGCTAGATTA 76291 ||||| || | | || ||||| |||||||||| | ||| || || |||| ||| Sbjct 415300 AATCATATGTCCTAT-TATCAGAATTTACAAACATATTTACAGCAATTGAGGCTAAATTG 415358 Query 76292 CAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACAC 76351 || || || | ||||| | | | | ||| | || || || || || | |||||||||| Sbjct 415359 CACACTGCAATTTCATTTGGACTAGAATACTCTACAATTTCAGTACACAAATTACTACAC 415418 Query 76352 TTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTAC-ATGAGTCCTTATAAAGAAC 76410 ||||| ||||| | ||||| || || || || | |||| || |||||||| | Sbjct 415419 TTGATTGTTCCCAAATTTTTATGATTTGATTTACGATTGCAATGA-TCTTTATAAAGCAT 415477 Query 76411 AAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTT 76470 | | |||||||| ||||||| || | | | ||||| | |||| | ||||||||| Sbjct 415478 ATAAGGAGTTCCTGTTTCAACTTGGGCAACAAGAATAGCTGTCCATAATTCTCTAGCTTG 415537 Query 76471 TATTATAGATTTGTATCGCTTCTCTCTTTCATAT 76504 ||| | ||| ||| ||||| | |||||| Sbjct 415538 AATTTGACGTTTATATATTTTCTCATTCTCATAT 415571 Score = 114 bits (126), Expect = 2e-20 Identities = 190/273 (70%), Gaps = 10/273 (4%) Strand=Plus/Plus Query 76963 AAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGC 77022 ||||| || ||||||||||| || || | ||| | |||| ||| | ||| |||||||| Sbjct 416261 AAGAATAC--CTAGACATTTGTTGTTGTATAGTACATGCAGAAAAAAGTGTTGGAGATGC 416318 Query 77023 ATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC--- 77079 ||| || || | ||| || | | ||| || ||||| |||||| |||||| || Sbjct 416319 ATGTGTAAAATAACGTTCTGATAAAAAATTATAAGTTTCTATAACTCTTTCTATGTCTTC 416378 Query 77080 -CCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCT 77138 |||| |||| | || || || | ||| |||||||| || |||| ||| ||| | Sbjct 416379 ACCATGGATG----GCAACTGCAACTCTCATTAACATATGTTGTGGTCTTTCAACAACTT 416434 Query 77139 TATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATG 77198 | || |||||| | ||||| |||| | ||||| |||||||||||||| || Sbjct 416435 TCCCATGTATTTTTAGTAAGTAACTCCTTTCAAGCGTTTTGAAACCAAAATAGTTATAGC 416494 Query 77199 AAAAGTCTCTTTCGTAAATAATAACCGAATTTA 77231 |||||||| || ||||| || | || |||| Sbjct 416495 TGAAGTCTCTATCATAAATTATTGCAGAGTTTA 416527 Score = 105 bits (116), Expect = 1e-17 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 75952 TCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGC 76011 ||| ||||| ||||| || || || | || ||||| || || || || || ||||| || Sbjct 414934 TCCTTTATAGGTTTCATATGTACCTTTCTCCTCAGCAAGCTCACAGCTAGCTTCTAAAGC 414993 Query 76012 ACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAA 76071 || |||||| | ||||| || |||| ||||||| | || || || ||| ||||| Sbjct 414994 ACTGTAATATAACGTTTCAAATATCTGGATATTAAGCTTCTGTGCCTCTTCACTTTCAAA 415053 Query 76072 AGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACC 76122 ||||| | | | || |||||||||||| || || |||||||||||||| Sbjct 415054 TGGATATCGCATTAAAAGAAATGCATCTGCAAGACCTTGAACTCCAATACC 415104 >seq967 Length=1612715 Score = 161 bits (178), Expect = 1e-34 Identities = 173/226 (77%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 46890 ATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGC 46949 |||| ||| |||||| || || || | | ||||||||||||||| | ||||| || || Sbjct 653249 ATCTGTAATATATGTGTCAATCAATAAAGAATACATTTCTGAATGTACATTTTCCATGGC 653190 Query 46950 CATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTC 47009 | ||||| || |||||||| | ||| || || | |||||| ||| || ||||||||| Sbjct 653189 AACTTGAAAGCCATAAAAACAACGTGCCTCTGTTACCTGTACTTCTTGACTAAATCGTTC 653130 Query 47010 AGACAA-ATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAA 47068 | |||| ||| ||||| |||||||||||| ||||||||||||||| |||||||| | Sbjct 653129 A-ACAAGATTTTCATTAACTATTCCATCAGAAGCAGCAAAAAATGCTAATACATGAGATA 653071 Query 47069 TAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATC 47114 |||||| ||| |||| | ||| | |||||||||| ||||| Sbjct 653070 TAAAATGTTTCTCATTGTCAGTTAAACGATTCCAGTCAAATATATC 653025 Score = 118 bits (130), Expect = 2e-21 Identities = 158/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 46427 TATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACG 46486 || ||| |||| | | ||||||||| || || |||||||||||| ||||| ||||| Sbjct 653895 TACAAACCTTTTGACAGCCTAATTCTATAAGCAATCTATCTGCAACAAATTCAATATATT 653836 Query 46487 TTTTCATCATTTCACAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACT 46546 ||| | || || ||||| ||||| | || || || | ||| || || | ||| | Sbjct 653835 GGCACATAAGTTTGCAGTTCATGCCTATCATTTCAACAGGCAAAGCTTCTGTTAAAAATT 653776 Query 46547 CTTGTTCAATAGTGACAGCATCCGATATTATCGATGTTACTGTTTCCTCACTTGGTGGAT 46606 |||||||||| |||||||||| || || ||||| ||| ||| | |||| | Sbjct 653775 CTTGTTCAATTTTGACAGCATCTTTAATAATTGATGTGACTCGATCCGGAGGTGGTTTTT 653716 Query 46607 GCATCAAATGTTTAAACATTAAACATGCAAAATCACAATG 46646 | || | ||||| |||||||||||||| ||||| ||||| Sbjct 653715 GTATAATGTGTTTGAACATTAAACATGCGAAATCGCAATG 653676 Score = 102 bits (112), Expect = 1e-16 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 47125 TCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCA 47184 || |||||||| ||||||| || || ||||| |||||||||||||||||||| || ||| Sbjct 652940 TCCACTTCTTCCACTGTCCAAAAAGATGCCTCAGCTTTTTTATACATATTCCAAATGTCA 652881 Query 47185 CGATATTGGATCGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGTATAGGTTC 47240 | |||| || ||||||| |||||| ||| |||||||| | |||| ||||| Sbjct 652880 GGCCATTGAATAGGAAAAACAACAAACCTACGTGGATTTTCTTTTAGTAATGGTTC 652825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 711262470803520