Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09]
187,611 sequences; 596,278,454 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq967 127 2e-24
>seq967
Length=1612715
Score = 127 bits (140), Expect = 2e-24
Identities = 152/205 (74%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 23761 TTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATA 23820
||||||| | |||||| |||||||| ||||| | |||| ||||||||| ||||| | |
Sbjct 653259 TTTTCTT-AGCATCTGTAATATATGTGTCAATCAATAAAGAATACATTTCTGAATGTACA 653201
Query 23821 TTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTA 23880
||||| || |||| ||||| ||||||||||| | || || | | || || || | |
Sbjct 653200 TTTTCCATGGCAACTTGAAAGCCATAAAAACAACGTGCCTCTGTTACCTGTACTTCTTGA 653141
Query 23881 AAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGA 23940
||||| || | | | |||||| ||||| || |||||| ||||||||| || || |
Sbjct 653140 CTAAATCGTTCAACAAGATTTTCATTAACTATTCCATCAGAAGCAGCAAAAAATGCTAAT 653081
Query 23941 ACATATTTTATAAAATGTCTTTCAT 23965
|||| |||||||||| | ||||
Sbjct 653080 ACATGAGATATAAAATGTTTCTCAT 653056
Score = 96.9 bits (106), Expect = 4e-15
Identities = 131/183 (72%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592
|| || ||| ||| | ||||||| |||||| | ||||||||||| |||| ||| ||
Sbjct 653557 TCGTCTCTAGAAATAAGTTCATTACTAAATGTAAGTCCTGGCATTAGACCTCTTTTCTTT 653498
Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652
| ||| ||||| |||||||| || |||||||||||| || || || ||||| ||
Sbjct 653497 AGCCAGAATATAGCAGCAAAACTGCCACTAAAGAAAATACCTTCTACCGCAGCAAATGCA 653438
Query 23653 ACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCC 23712
|| | ||| | ||| || ||| | | | || |||||| ||| || ||| |||||
Sbjct 653437 ACCACACGCTCAGGAAAGGTCGCACTTTCGTGAGTAATCCAATTTAATGCCCAGTTAGCT 653378
Query 23713 TTC 23715
|||
Sbjct 653377 TTC 653375
Score = 82.4 bits (90), Expect = 8e-11
Identities = 134/190 (71%), Gaps = 6/190 (3%)
Strand=Plus/Minus
Query 23341 CTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTT 23400
|||||||| ||||||||||||||||| ||||| | | |||| || ||||| | ||
Sbjct 653860 CTATCTGCAACAAATTCAATATATTGGCACATAAGTTTGCAGTTCATGCCTATCATTTCA 653801
Query 23401 ACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGA 23460
|| || | || || ||| ||| || |||||| ||||||||||||| || ||||
Sbjct 653800 ACAGGCAAAGCTTCTGTTAAAAATTCTTGTTCAATTTTGACAGCATCTTTAA-TAATTGA 653742
Query 23461 ACAATAACTTCTTCACTAGGTGGATATTTTAAA---TACTTAAACAATAAACATGCAAAA 23517
| ||| || |||||| | || || | | || |||| ||||||||| |||
Sbjct 653741 --TGTGACTCGATCCGGAGGTGGTTTTTGTATAATGTGTTTGAACATTAAACATGCGAAA 653684
Query 23518 TCACAATGTA 23527
|| |||||||
Sbjct 653683 TCGCAATGTA 653674
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 520265038935400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |