Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq967 127 2e-24 >seq967 Length=1612715 Score = 127 bits (140), Expect = 2e-24 Identities = 152/205 (74%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 23761 TTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATA 23820 ||||||| | |||||| |||||||| ||||| | |||| ||||||||| ||||| | | Sbjct 653259 TTTTCTT-AGCATCTGTAATATATGTGTCAATCAATAAAGAATACATTTCTGAATGTACA 653201 Query 23821 TTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTA 23880 ||||| || |||| ||||| ||||||||||| | || || | | || || || | | Sbjct 653200 TTTTCCATGGCAACTTGAAAGCCATAAAAACAACGTGCCTCTGTTACCTGTACTTCTTGA 653141 Query 23881 AAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGA 23940 ||||| || | | | |||||| ||||| || |||||| ||||||||| || || | Sbjct 653140 CTAAATCGTTCAACAAGATTTTCATTAACTATTCCATCAGAAGCAGCAAAAAATGCTAAT 653081 Query 23941 ACATATTTTATAAAATGTCTTTCAT 23965 |||| |||||||||| | |||| Sbjct 653080 ACATGAGATATAAAATGTTTCTCAT 653056 Score = 96.9 bits (106), Expect = 4e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 || || ||| ||| | ||||||| |||||| | ||||||||||| |||| ||| || Sbjct 653557 TCGTCTCTAGAAATAAGTTCATTACTAAATGTAAGTCCTGGCATTAGACCTCTTTTCTTT 653498 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | ||| ||||| |||||||| || |||||||||||| || || || ||||| || Sbjct 653497 AGCCAGAATATAGCAGCAAAACTGCCACTAAAGAAAATACCTTCTACCGCAGCAAATGCA 653438 Query 23653 ACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCC 23712 || | ||| | ||| || ||| | | | || |||||| ||| || ||| ||||| Sbjct 653437 ACCACACGCTCAGGAAAGGTCGCACTTTCGTGAGTAATCCAATTTAATGCCCAGTTAGCT 653378 Query 23713 TTC 23715 ||| Sbjct 653377 TTC 653375 Score = 82.4 bits (90), Expect = 8e-11 Identities = 134/190 (71%), Gaps = 6/190 (3%) Strand=Plus/Minus Query 23341 CTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTT 23400 |||||||| ||||||||||||||||| ||||| | | |||| || ||||| | || Sbjct 653860 CTATCTGCAACAAATTCAATATATTGGCACATAAGTTTGCAGTTCATGCCTATCATTTCA 653801 Query 23401 ACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGA 23460 || || | || || ||| ||| || |||||| ||||||||||||| || |||| Sbjct 653800 ACAGGCAAAGCTTCTGTTAAAAATTCTTGTTCAATTTTGACAGCATCTTTAA-TAATTGA 653742 Query 23461 ACAATAACTTCTTCACTAGGTGGATATTTTAAA---TACTTAAACAATAAACATGCAAAA 23517 | ||| || |||||| | || || | | || |||| ||||||||| ||| Sbjct 653741 --TGTGACTCGATCCGGAGGTGGTTTTTGTATAATGTGTTTGAACATTAAACATGCGAAA 653684 Query 23518 TCACAATGTA 23527 || ||||||| Sbjct 653683 TCGCAATGTA 653674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520265038935400