Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq4103 96.9 5e-15 seq5123 87.8 2e-12 >seq4103 Length=935674 Score = 96.9 bits (106), Expect = 5e-15 Identities = 194/285 (68%), Gaps = 2/285 (1%) Strand=Plus/Plus Query 156164 AAACAATCGTCTGACGTTAGCTTCCGATTCACCCACATATTTGTTTAATAATTCAGGACC 156223 ||| |||| ||| | |||||||| ||| || |||||||||| || | || ||| || Sbjct 429800 AAATAATCTTCTAATATTAGCTTCACTTTCTCCAACATATTTGTCCAAAATTTGAGGGCC 429859 Query 156224 GTTAACTATTTTGACGGGTCGTG-ATTTAAAAGCTTGAGCGATACAGCGAGCCATTAATG 156282 || || ||||| || | |||||| | | | || || |||||||||| Sbjct 429860 ATTGACAATTTTAGGTTCTCTAGCATTTAACATAGTTC-CTATTTGCCGTGCCATTAATG 429918 Query 156283 TTTTACCGCACCCAGGAGGTCCGTATAACAATACTCCTTTTATATGTTTACAACCTAATT 156342 ||||||| || || || || || | || | |||||| | ||| |||||||| |||| Sbjct 429919 TTTTACCTGTACCTGGTGGACCATAAAGTAAAATTCCTTTAACATGCTTACAACCCAATT 429978 Query 156343 TTTCAGTTATTTCTACCGGAACTGATCTGGAAGCAAATGCTCTTCGAAAAATGAGAGAAA 156402 | |||||| |||| || || || ||||||||||| ||||| | || Sbjct 429979 GAGTAACAATTTCTGGTGGAAAAACTCGAGATGCGAATGCTCTTCGGAAAATAGCACTAA 430038 Query 156403 ATTCTTTATCCAATCCCCCCACACCCATTTCCTCAAAATTCCAAT 156447 |||||||||||| ||| || | ||||||| | ||||| ||||| Sbjct 430039 ATTCTTTATCCAGTCCACCAATTCCCATTTTTTGAAAATCCCAAT 430083 >seq5123 Length=351926 Score = 87.8 bits (96), Expect = 2e-12 Identities = 118/162 (73%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 50619 ATTTTAATGACCGCCTGGAATCCAACCGATATAGATCAAACCGTTTTACCTCCGTGTCA- 50677 ||| ||||||| || ||||||||| | ||||| |||| | ||||||| ||||| Sbjct 332551 ATTATAATGACTGCATGGAATCCAGCTGATATTTCACAAATGGCCCTACCTCCCTGTCAC 332610 Query 50678 TGTTTTATGTCAATTTTATGCCACAGACAATGTTTTATCCTGTCAATGTTATCAAAGATC 50737 ||| || | ||||||||||| | || || | ||||| |||||| |||||||||| Sbjct 332611 TGTCTTGT-TCAATTTTATGTGAATGATAAAGAGTTATCATGTCAACTTTATCAAAGAAG 332669 Query 50738 AGCTGATATGGGTTTAGGCGTTCCTTTCAACGTAGCTTCTTA 50779 || ||||||||| | || || || || || | || ||||| Sbjct 332670 TGCAGATATGGGTCTTGGAGTACCATTTAATATTGCATCTTA 332711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665510816933160