Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq5459 84.2 2e-11 >seq5459 Length=1306269 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||| |||||||| || || ||||| | | || || ||||| || || || || Sbjct 706822 CTCCTTCTGGATGTTATAATCTGAAAGGGTTCTTCCATCTTCCAGCTGTTTCCCAGCAAA 706881 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 |||| || || || || | ||||| | ||||| || ||| ||| ||||| Sbjct 706882 GATCAAACGTTGCTGATCAGGGGGAATTCCTTCCTTATCTTGGATCTTTGCCTTCACATT 706941 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | ||||| | || ||||||| || || ||||| || || || ||||| || Sbjct 706942 CTCTATTGTGTCAGAAGCTTCTACCTCCAAGGTGATGGTTTTTCCTGTGAGGGTCTTAAC 707001 Query 41851 GAAAATCTGCATGTTATCGAT 41871 ||| ||||||||||| | ||| Sbjct 707002 GAAGATCTGCATGTTTTAGAT 707022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461219833553200