Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq10805 156 6e-33 seq14022 145 1e-29 seq4062 134 2e-26 seq42335 122 1e-22 >seq10805 Length=234 Score = 156 bits (172), Expect = 6e-33 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| | || |||||||| || ||| | || ||||| || Sbjct 19 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAAACCATTACTTTGGAAGTTGAACCATCG 78 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| ||||| ||||| ||||| ||||||||||| ||||| ||||| Sbjct 79 GATACCATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGTATTCCACCAGATCAG 138 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | || ||||| || |||||||| || ||| | || || || |||||||| Sbjct 139 CAGCGATTGATCTTTGCCGGTAAACAATTGGAAGATGGCCGTACTTTGTCCGATTATAAC 198 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGT 124754 ||||||||||||||||| ||||||||||| || ||| Sbjct 199 ATTCAAAAAGAATCAACATTGCATTTGGTATTGCGT 234 >seq14022 Length=1756 Score = 145 bits (160), Expect = 1e-29 Identities = 241/343 (70%), Gaps = 10/343 (3%) Strand=Plus/Minus Query 205618 GGATTCCAGGCTGTTAATATTATATTTCTA-GAT--TCAGGtttattttttattttattt 205674 |||||||| || | |||| || ||| | ||| || || || |||| || ||| | Sbjct 1351 GGATTCCATGCCG---ATATAATCATTCGACGATCATCCGGATTCGTTTTGATCGTATGT 1295 Query 205675 atAATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATAT 205734 || | ||| |||||||||||| ||||| |||||| |||| |||| |||| Sbjct 1294 ATTAGTTGTTTTAATTGATCAACACCTTGTCCATTATAATCGGTATAATTATCTCGATAT 1235 Query 205735 TTAGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTCTTTTCTA 205794 | ||||||||||| | ||||||||||||||| || ||||||| ||| ||||||| | | Sbjct 1234 TCGGCACCAAAATGTCTCCATTGAAAACCATATACCGGACCTAGATCTCCTTCTTGACGA 1175 Query 205795 TCATTAAAACCACGtttttttatatattttaatgatccattttcatcccaaatatggatt 205854 || |||| ||| | | | | | ||| | ||||||||| ||||||| || | | Sbjct 1174 TCGGTAAATCCAAGACTATCAAGAAATTCTCTCGATCCATTTGCATCCCAGATTTTTACG 1115 Query 205855 cctttattttttaGAATATTT--GTATTAGTTGATCCAGATATAAACCATAATAATTCTT 205912 ||||| || | ||| ||| | || |||||| || |||||||||||||| |||| Sbjct 1114 CCTTT--TTCGGATAATTTTTTCGAATCAGTTGAACCTTGTATAAACCATAATAGCTCTT 1057 Query 205913 CAACAATTCCTCTCCAAAACATTGATTTTGTTGTAAATAATGG 205955 |||||| | | |||||| | ||| ||||||| ||||| Sbjct 1056 CAACAACAGCACGCCAAAATACACGTTTCGTTGTAATCAATGG 1014 >seq4062 Length=326 Score = 134 bits (148), Expect = 2e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || || | || || ||||| || || | || |||| || | Sbjct 117 ATGCAAATTTTCGTCAAAACTTTGACTGGTAAAACCATCACATTGGAAGTTGAGCCATCT 176 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || ||| ||||| |||||| || |||||||| || || ||||| ||||| Sbjct 177 GATACGATCGAGAATGTAAAAGCGAAAATCCAGGATAAAGAGGGAATTCCACCAGATCAG 236 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | |||||||| || ||||||||||| ||| |||||||||| |||||||| Sbjct 237 CAGCGATTGATTTTTGCTGGCAAACAATTAGAAGATGGTCGAACATTGTCCGATTATAAC 296 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGT 124747 || ||||| ||||| || ||||||||||| Sbjct 297 ATCCAAAAGGAATCGACCTTGCATTTGGT 325 Score = 96.9 bits (106), Expect = 5e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 124651 CTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAG 124710 ||||||| ||| | | |||||||| || ||||| || || ||| |||| || || | Sbjct 1 CTGATCAGCAACGTTTGATTTTTGCCGGTAAACAGTTGGAAGATGGTCGTACGTTGTCTG 60 Query 124711 ATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTA 124770 | |||||||| || ||||||||||||||||||||||| || ||| | || ||||| || Sbjct 61 ACTATAATATCCAGAAAGAATCAACTTTGCATTTGGTATTGCGTCTTCGTGGTGGCATGC 120 Query 124771 AAAATT 124776 ||| || Sbjct 121 AAATTT 126 >seq42335 Length=1439 Score = 122 bits (134), Expect = 1e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| |||| ||| | || || ||||||||||| | || | ||| | Sbjct 31 ATGCAAATCTTTGTAAAAACATTGACTGGTAAAACTATAACATTGGAAGTCGAACCGTCG 90 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || ||| | ||| ||||| || || || |||||||| || || ||||| Sbjct 91 GACACTATCGAAAATGTTAAATCCAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAG 150 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || ||||| ||||| ||||| || ||| | |||||||| ||||| || Sbjct 151 CAACGATTGATCTTTGCCGGAAAGCAATTGGAAGATGGCCGAACATTGTCTGATTACAAC 210 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACG 124753 || ||||| |||||||||||||| ||||| || || Sbjct 211 ATACAAAAGGAATCAACTTTGCACTTGGTATTGCG 245 Score = 116 bits (128), Expect = 6e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | || ||| | || || ||||| || || | || | || || Sbjct 259 ATGCAGATTTTCGTGAAAACATTGACCGGTAAAACCATCACCTTGGAAGTGGAGCCATCA 318 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 |||||||| ||| | ||| ||||| ||||||||||| || || || || || || Sbjct 319 GATACAATCGAAAATGTCAAATCTAAAATCCAAGATAAAGAGGGAATTCCGCCAGACCAG 378 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | |||||||| ||||| ||||| || ||| ||||||| || ||||| ||| Sbjct 379 CAACGTTTGATTTTTGCCGGAAAGCAATTGGAAGATGGTCGAACTTTGTCCGATTACAAT 438 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 || ||||| ||||| || ||||||||||| || || | || ||||| Sbjct 439 ATCCAAAAGGAATCGACATTGCATTTGGTATTGCGACTTCGTGGTGG 485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 754769016643200