Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq10805 87.8 2e-12 seq42335 86.0 7e-12 >seq10805 Length=234 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||| |||||||||||||| || |||||||| || ||||| | || ||| || | Sbjct 234 ACGCAATACCAAATGCAATGTTGATTCTTTTTGAATGTTATAATCGGACAAAGTACGGCC 175 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || | || ||||| || || || | ||||||||| || | || | | || || Sbjct 174 ATCTTCCAATTGTTTACCGGCAAAGATCAATCGCTGCTGATCTGGTGGAATACCTTCTTT 115 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| |||||| ||| | | | | || || | ||| || || | || || Sbjct 114 GTCTTGGATTTTAGCTTTTACATTTTCAATGGTATCCGATGGTTCAACTTCCAAAGTAAT 55 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||||||| || | ||||| |||||||||||||| Sbjct 54 GGTTTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 19 >seq42335 Length=1439 Score = 86.0 bits (94), Expect = 7e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 ||||| ||||| ||||| || |||||||| || |||||||||| || || || | Sbjct 245 CGCAATACCAAGTGCAAAGTTGATTCCTTTTGTATGTTGTAATCAGACAATGTTCGGCCA 186 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || | ||||| || || || || | ||| ||||| || | || | | |||||| Sbjct 185 TCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGAGGGATACCTTCCTTG 126 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 ||| |||||| ||| | | | | ||||| || ||| || || | || || Sbjct 125 TCCTGGATTTTGGATTTAACATTTTCGATAGTGTCCGACGGTTCGACTTCCAATGTTATA 66 Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || || | || ||||||||||||||||| Sbjct 65 GTTTTACCAGTCAATGTTTTTACAAAGATTTGCAT 31 Score = 82.4 bits (90), Expect = 9e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 ||||| |||||||||||||| |||||||| ||||||||||| | || ||| || | Sbjct 473 CGCAATACCAAATGCAATGTCGATTCCTTTTGGATATTGTAATCGGACAAAGTTCGACCA 414 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || | ||||| || || || || | || |||||||| | ||| | | ||| || Sbjct 413 TCTTCCAATTGCTTTCCGGCAAAAATCAAACGTTGCTGGTCTGGCGGAATTCCCTCTTTA 354 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 || |||||| ||||| | | | || || | ||||| || | |||||| Sbjct 353 TCTTGGATTTTAGATTTGACATTTTCGATTGTATCTGATGGCTCCACTTCCAAGGTGATG 294 Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || || | || || || || || ||||| Sbjct 293 GTTTTACCGGTCAATGTTTTCACGAAAATCTGCAT 259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571297610517720