Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq42335 123 4e-23 seq4062 111 2e-19 seq10805 107 3e-18 >seq42335 Length=1439 Score = 123 bits (136), Expect = 4e-23 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 ||||||| | ||||| ||||||||||| || || ||||| || ||||| ||||| | Sbjct 487 TTCCACCACGAAGTCGCAATACCAAATGCAATGTCGATTCCTTTTGGATATTGTAATCGG 428 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | | ||||| | ||| || ||||| ||||| ||||||||||| | |||||| || || | Sbjct 427 ACAAAGTTCGACCATCTTCCAATTGCTTTCCGGCAAAAATCAAACGTTGCTGGTCTGGCG 368 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 ||||||| ||||||||||| |||||||| || | Sbjct 367 GAATTCCCTCTTTATCTTGGATTTTAGATTTGACATTTTCGATTGTATCTGATGGCTCCA 308 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 |||| | ||||| |||||||| || |||||||| | ||| || ||||| Sbjct 307 CTTCCAAGGTGATGGTTTTACCGGTCAATGTTTTCACGAAAATCTGCAT 259 >seq4062 Length=326 Score = 111 bits (122), Expect = 2e-19 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 146069 ACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCT 146128 |||||||| || || ||||| || || |||||||| || | |||| | ||| ||| Sbjct 325 ACCAAATGCAAGGTCGATTCCTTTTGGATGTTATAATCGGACAATGTTCGACCATCTTCT 266 Query 146129 AATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTGN 146188 |||||||| |||||||||||||||| |||||||| || |||||||| |||||||| || Sbjct 265 AATTGTTTGCCAGCAAAAATCAATCGCTGCTGATCTGGTGGAATTCCCTCTTTATCCTGG 206 Query 146189 NNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACTTCTAGTGTGATTGTTTTA 146248 ||||| || || ||||| | |||||| |||||| Sbjct 205 ATTTTCGCTTTTACATTCTCGATCGTATCAGATGGCTCAACTTCCAATGTGATGGTTTTA 146 Query 146249 CCTGTTAATGTTTTAATGAATATTTGCAT 146277 || || || ||||| | ||| |||||||| Sbjct 145 CCAGTCAAAGTTTTGACGAAAATTTGCAT 117 >seq10805 Length=234 Score = 107 bits (118), Expect = 3e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125 ||||||||||| || || |||||||| || |||||||| || | ||| | || ||| Sbjct 230 AATACCAAATGCAATGTTGATTCTTTTTGAATGTTATAATCGGACAAAGTACGGCCATCT 171 Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185 || |||||||| || ||||| ||||||| |||||||| || ||||| |||||||| ||| Sbjct 170 TCCAATTGTTTACCGGCAAAGATCAATCGCTGCTGATCTGGTGGAATACCTTCTTTGTCT 111 Query 146186 TG 146187 || Sbjct 110 TG 109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 742850264974080