Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq42335 107 1e-18 seq10805 89.7 4e-13 seq4062 84.2 2e-11 >seq42335 Length=1439 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || |||| | ||||| ||| | |||||||| ||||| |||||||| || | | Sbjct 257 CCGCCACGAAGTCGCAATACCAAGTGCAAAGTTGATTCCTTTTGTATGTTGTAATCAGAC 198 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | |||| | |||||||||||| || || ||| |||| | || ||| ||||| || Sbjct 197 AATGTTCGGCCATCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGAGGG 138 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | |||||||| || |||| || || | | | | |||||| || ||| | Sbjct 137 ATACCTTCCTTGTCCTGGATTTTGGATTTAACATTTTCGATAGTGTCCGACGGTTCGACT 78 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | || || |||| || ||||||||||||||||| |||||||| Sbjct 77 TCCAATGTTATAGTTTTACCAGTCAATGTTTTTACAAAGATTTGCAT 31 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || || |||| | ||||| || | ||| ||||| ||||| || ||||| |||| Sbjct 486 TCCACCACGAAGTCGCAATACCAAATGCAATGTCGATTCCTTTTGGATATTGTAATCGGA 427 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 || ||| || |||||||||||| || || ||| | || | | ||| || || || Sbjct 426 CAAAGTTCGACCATCTTCCAATTGCTTTCCGGCAAAAATCAAACGTTGCTGGTCTGGCGG 367 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | || || ||||| |||| ||||| | | | | || || ||||| Sbjct 366 AATTCCCTCTTTATCTTGGATTTTAGATTTGACATTTTCGATTGTATCTGATGGCTCCAC 307 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | ||||||| |||| |||||||||||||| || ||||| ||||| Sbjct 306 TTCCAAGGTGATGGTTTTACCGGTCAATGTTTTCACGAAAATCTGCAT 259 >seq10805 Length=234 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 18116 TACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTC 18175 ||||| || | ||||||||||||||||||||| || |||| || || | |||||| Sbjct 228 TACCAAATGCAATGTTGATTCTTTTTGAATGTTATAATCGGACAAAGTACGGCCATCTTC 169 Query 18176 CAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGC 18235 ||||||||| || ||| |||| | || || ||||| || | ||||| || || Sbjct 168 CAATTGTTTACCGGCAAAGATCAATCGCTGCTGATCTGGTGGAATACCTTCTTTGTCTTG 109 Query 18236 AATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTT 18294 |||| | || || || | | ||| || || || || ||| | || ||| ||| Sbjct 108 GATTT-TAGCTTTTACATTTTCAATGGTATCCGATGGTTCAACTTCCAAAGTAATGGTTT 50 Query 18295 TGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| ||||| || || ||||| |||||||| Sbjct 49 TGCCAGTCAAGGTCTTGACAAAGATTTGCAT 19 >seq4062 Length=326 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188 || ||||| ||||| ||||| || |||| || |||| || |||||| ||||||||||| Sbjct 313 GTCGATTCCTTTTGGATGTTATAATCGGACAATGTTCGACCATCTTCTAATTGTTTGCCA 254 Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGC-TT 18247 ||| | || | || || ||||| || | || || ||||| |||| | || || Sbjct 253 GCAAAAATCAATCGCTGCTGATCTGGTGGAATTCCCTCTTTATCCTGGATTT-TCGCTTT 195 Query 18248 GACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGT 18307 || | | | || ||| ||||| ||| | |||||| |||| || ||||| || Sbjct 194 TACATTCTCGATCGTATCAGATGGCTCAACTTCCAATGTGATGGTTTTACCAGTCAAAGT 135 Query 18308 TTTTACAAAAATTTGCAT 18325 ||| || ||||||||||| Sbjct 134 TTTGACGAAAATTTGCAT 117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379007662822005