Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_003309.1 Length=53373 Score E Sequences producing significant alignments: (Bits) Value seq8893 176 2e-39 >seq8893 Length=7363 Score = 176 bits (194), Expect = 2e-39 Identities = 637/971 (66%), Gaps = 47/971 (5%) Strand=Plus/Minus Query 33405 TCAGCTTCAGCGGGCGGGATATAGCCGAGCGGTTCCATCAGCCGATGATGGTTGTACCAG 33464 || ||||| || |||||||||| || ||| ||||| || || | | ||| |||||| Sbjct 6720 TCCGCTTCTGCCGGCGGGATATGCCCCAGCCTTTCCAGCAAGCGCCGGTTGTTATACCAG 6661 Query 33465 GCGACCCATTCCAGCGTTGCCAGTTCGACGGATTCC-CTCG--TTTTCCAAGGGGCGCGC 33521 | ||||| ||||||| |||||||| || |||| | || ||||||| || | Sbjct 6660 TCCACCCACGCCAGCGTCGCCAGTTCCAC---TTCCGCGCGGCTTTTCCA----GCTCTT 6608 Query 33522 -CGATGAATCAGTTCCGTCTTGTACAGGCCGTTGATCGTTTCGGCCAGCGCATTGTCGTA 33580 || || |||| |||| ||||| || |||||||| | || |||| |||||||||||| Sbjct 6607 ACGGTGTATCACCTCCGCTTTGTAAAGCCCGTTGATGCTCTCTGCCATCGCATTGTCGTA 6548 Query 33581 GCTGTCGCCCCGGCTGCCGACTGAGGGCTCGATGCCGGCCTCAGCCAGCCGTTCGCTGTA 33640 ||| || |||||| ||| | | | | || || ||||| | |||| Sbjct 6547 TGAGTCACCTGTGCTGCCCGTTGATGCCAGCAGCTCCGCATCCTTTAGCCGCTGCGTGTA 6488 Query 33641 GCGAATGCTG-ACGTATTGAGACCCCCTGTCGGAATGATGAATCAAAGT-CCCGTCCTCG 33698 || || || || || || || |||| || ||||| || || ||||| Sbjct 6487 -CGCCAGCGACACATACTGCGAGCCTTTGTCTGAGTGATGGATG---GTGCCCGTG---- 6436 Query 33699 CCCGGTTGGCGGGCGTACAGCGCTTGTTCAAGTGCATCCAGAACAAAGTCCGTGGTCATC 33758 || | | ||| ||||||| || || ||||||||||| || || ||| |||| Sbjct 6435 ---GGACGTCTGGCCCACAGCGCCTGCTCCAGTGCATCCAGCACGAACGTCGTTTCCATC 6379 Query 33759 GACGAGCTGACCCGCCAGCCAACAATACGGCGGGCGAACACGTCGATCACGAATGCCACG 33818 || ||| ||||||||||| || ||||||| |||||||||||| | | ||| |||||| Sbjct 6378 GATGAGGATACCCGCCAGCCCACGATACGGCCTGCGAACACGTCGGTGATGAACGCCACG 6319 Query 33819 TACAGCCAGCCTTGCCATGTCGAGACATACGTAAAATCCGACACCCAGAGCTGATTCGGT 33878 ||| |||| ||||| || ||| ||||| || |||| |||||| ||||| | ||| Sbjct 6318 TACGCGAAGCCCTGCCAGGTACTGACGTACGTGAAGTCCGCCACCCACAGCTGGTCCGGC 6259 Query 33879 CGGTCAGCCTTGAACTGCCGGTTGACTCGGTCCAGCGGGCGCGGCGCGGTCACATCGGTA 33938 | | ||| |||||||||||| || |||| || | | || | | || | | Sbjct 6258 CTTTGCGCCACGAACTGCCGGTTCACCCGGT-CATCTGCAGCATCATCCTTAC--GGCTG 6202 Query 33939 ATCGTCGTGCGAACACGCTTACCGCGAACTGCGC-CAC--GCAAGCCCTG-CAGCTTCAT 33994 | || || || || || || || |||| ||| ||||||| | ||||||||| Sbjct 6201 ACGGTGGTCCGGACCTTTTTGCCCCG----GCGCACACCTTCAAGCCCCGCCAGCTTCAT 6146 Query 33995 CAACCGTCCGACCGTGCAGCGTGCCACCGTAATGCCTTCCCGGTTCATCTGCTTCCAGAC 34054 || ||| | ||||| || | ||||| | ||| |||||| || ||| |||||| Sbjct 6145 CAGCCGGGCCACCGTACATCTGGCCACGCTGATGTTCTCCCGGAGCAGCTGGCGCCAGAC 6086 Query 34055 CTTCGGCACGCCGTAGAC-CTGCATGTTGGCCTGCCAGACACGC-TTG-ATCTCCGGTTG 34111 ||| | ||||| || || ||| ||| | | | |||||| ||| |||||| | Sbjct 6085 CTTACGGACGCCATACACACTG-TGGTTTTCAT--CGTACACGCGTTGTATCTCCACCTT 6029 Query 34112 CAAAAGCTCATCGCG--TTTCGCGCGGGCGCAGCGTTTCGACGGATCGCG-AAGTTGTGC 34168 || || || || || ||| ||| | || |||||| ||| ||| || ||| Sbjct 6028 CAGAATATCGTCACGGCGTTCCCGCTG--GCTGCGTTTTTCCGGGAAGCGTCTGTGTTGC 5971 Query 34169 TGCATGGCGTCGGTAGCCCGACGGGGCAATCCGCAAGACCTTGCAGATCGGCTCGACCCC 34228 || ||| || || |||||||||| || || | | ||| | ||| ||||||| Sbjct 5970 TG-ATGCCGGTAATACACCGACGGGGCGATATCCAGCTCGTGGCATACCGGTCCGACCCC 5912 Query 34229 GAAGGTGTCGCGATGCTGATCAATGAAGGCCTTCAGGACTTGAAACGGCGGTCGAGCTCC 34288 | | |||||| | ||| | | || | | || | ||||||||| |||| Sbjct 5911 GTATTCGTCGCGCAGGGCATCCACCAGGGGTGTTACTTTTTCCACAGGCGGTCGAACTCC 5852 Query 34289 GCCTGAGCGAAAAACGCGCTCGCCAGTTTGAGAATCTCGTTGGTCCGGCGCAGTTCCTTG 34348 |||| || ||| | ||| ||| | || || |||||| | ||||||||||| | Sbjct 5851 GCCTTCGCAAAATAAGCGGAAGCCTGACGCAGGATATCGTTGCTGCGGCGCAGTTCGCGG 5792 Query 34349 ACCTCGCGCTC 34359 || || ||||| Sbjct 5791 ACTTCACGCTC 5781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 170524557419230