Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq33447 307 1e-78 >seq33447 Length=1513 Score = 307 bits (340), Expect = 1e-78 Identities = 647/950 (68%), Gaps = 30/950 (3%) Strand=Plus/Plus Query 13309 AACTAAAAATCAACATCTAATGAAAAA-ACATTATCGTCT--TTGTTAGAAATAACGCCC 13365 || |||||||||||||| ||| ||| | | ||| || | || || || || || Sbjct 49 AATTAAAAATCAACATCGG-TGACAAATATCTGATCTTCAGGTCGT--GACATGACACCA 105 Query 13366 ATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATA 13425 ||||||||||||| ||| | |||||| ||||| || | ||||||||||| |||||| Sbjct 106 CTTTTTTGATATTCGGCAACACGTTTTTCGAAAAAATTCGATTTACCTTCCAATGATATC 165 Query 13426 TTTTCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAAT 13485 | |||||| |||||||||||||| || || | ||| |||||| ||| ||| | Sbjct 166 TGTTCCATGAAATCGAATGGATTCACTGTTTTATAATGTTTTTCACAATCTAATTCGATC 225 Query 13486 AATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATT 13545 ||||| | ||| ||| | | ||||| || | | |||||| | |||||||||| || Sbjct 226 AATAAACGATCGGCACAATATTCAATGTAATCGGCCATTAATTTCGAATTCATACCGATC 285 Query 13546 AGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATA 13605 | | ||| || | | || || | |||||| | ||| ||| ||||| ||| ||| Sbjct 286 AATGATACGGGTAATGCATCGGTAAGAAATTCCTGTTCAATATTAACAGCATCG---ATA 342 Query 13606 ATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAG----ATGTTTAAAAATTAAACA 13661 || || | | ||| || || | || | | ||| ||| | || | | ||| Sbjct 343 ATGATTTCAGCAAT-TCTTTGTGATGATGGTCGATTACGAATATGATGGAATAAAAGACA 401 Query 13662 CGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCC 13721 |||||||||||||| | || ||||| | ||| | ||| || ||||| || | || Sbjct 402 GGCAAAATCACAATGTAATCCTTCATCACGTGAAATCAATTCATTCGAAAAGGTAAGACC 461 Query 13722 TGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATAT 13781 ||||| | || |||||||| | |||||| ||||| || ||||| |||||||| || || Sbjct 462 AGGCATTAGGCCACGTTTTTTAAGCCAAAAAATTGCCGCAAATGAACCGGAAAAAAAGAT 521 Query 13782 TCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATAT 13841 ||| || || || ||||| || |||| ||||| |||| | | | | | | Sbjct 522 TCCTTCGACGGCTGCAAATGCAATTAAACGTTCGGCAAATGTAACCGAATCATCCTGTGT 581 Query 13842 CCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAA 13901 ||| | ||||||||| || ||| || | || | || | | ||| |||||||| Sbjct 582 CCAACGTATAGCCCATTTAGCTTTCTTCTCAACACAAGGTAAATTACGGATAGCATTGAA 641 Query 13902 TAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTC 13961 || | |||| || ||| | | | ||||||| ||| | ||| ||||||||| Sbjct 642 TAGAAAATCCTGTTCATTACGATCGGTTACATATGTATTAATCAATAATGAATACATTTC 701 Query 13962 AGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTG 14021 || || | ||||| || || |||||||| ||||| ||||| | ||||| | ||| Sbjct 702 CGAATGAACATTTTCGATGGCAATCTGAAATCCATAGAAACAACGTGCTTCAGGTATTTG 761 Query 14022 TACCTC-CGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAA 14080 ||| || ||| ||||| | ||| |||| |||||||| || ||||||||||| || |||| Sbjct 762 TACATCACGAATAAAA-CGTTCAGCCAGATTTTCATTTACGATACCATCACTGGCGGCAA 820 Query 14081 AAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTG--TTGAGTTTTTTCCAATC 14138 |||| ||||||| | ||| || | || || | ||| || | ||| ||||||| Sbjct 821 AAAAAGCCAATACATGCGAAATGAAATGTTTTTCAT--TTGCATTCAATTTATTCCAAT- 877 Query 14139 GGCTAA-ATC----CTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCT 14193 | ||| ||| ||| ||||| ||||| || || ||||| || || | ||| Sbjct 878 GTATAAGATCACGGCTT----AGATCGACTTCTTCGACGGTCCAGAATGATGCTTCGGCT 933 Query 14194 TTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAA 14243 |||||||||||| ||| || || | |||| ||| ||||| | ||||| Sbjct 934 TTTTTATACATTCTCCAAATATCATGATATTGTATTGGAAACAAAACAAA 983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478153589292360